Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03674 ATGAACAACGAAACCGAATTGGTTCAACTTTGCATAAACGCAGCTTGCAAAACCAAACAAACCGTTGACAAATGGCGCTTACAGAGACGCTCTCTCGATCGCATACCTTCTCATCTCGCCGACGCTCTCCTCCGCCGCCTCATCACTCGCCGCCTTCTCCACCCCTCCCTCCTCGAGGTTTTCAAACACAGTGCGGAAGAGATTGATTTGAGAGGCGAAAACGCCGTTGATGCAGAATGGATGGCGTATTTAGGAGCATTTCGTCATTTGCGCTATTTAAATATTGCAGAATGTCACCGAGTCAATTCTTCAGCTCTTTGGCCTACTGCAGGAATGAATAGTCTTAAAGAGTTGGATCTATCTAGATGCGCGAAAATTAATGATTCTGGAATTAATCATATACTTTCCATTTCTAATTTGGAAAAGTTGCACATTTCGAAAACTGGTGTTACTGCCAAAGGAATTAAGCTACTTGCTTCGCTAAAAAACTTGTCTCTTCTTGATTTGGGTGGTTTGCCGGTGGATGATGCGTGTTTAGCTTCGTTACAGGTACTGGAAAATCTTCAACAAATTGAACTCTGGGGTAGTAAAGTATCAAACGAAGGCGCTGCCCTTCTTAATACGTTCCCCAAGTTAACCCATCTAAATCTTGATTGGACCAGCGTCACAAAACTGCCTAATTTATCGACTCTTGAATGCCTCAATATGAGTAATTGTACTATTGACTCTATTCTCAAAGATGATAAATCTCCTTTGACAAAGCTTATTTTCTCTGGGTCTAAATTCCTGAATGAAGCAGAAACCCTATTGTACGCAAATACAAATTTCTTGTCCTTTCTAGACTTGGCCCATACTGGCCTTGACAAATTCTTCTTTCTAAGTAAACTGAAAGTAATAGAACATCTCAATCTCAGCTCATGTATGATGGATGATGATTCAGTTGAGATGGTTGCATGTATTGGTGGAAAGTTGAAAAGTCTGAATCTGAGTGGTACTTGGGTTACCTCTGCTGGAGTAGGGATTTTAGCTGGACATGTTCCCAATCTTGAAATTCTGTCACTATCTCAAACATCAGTGGATGATACTGCCTTCTCATTTATCAGCATGATGCCTTCATTGAAGGATGTTGATCTGAGCAGTACAAACATTAAAGGGTTTTTGAACCAGGGAAGTAATGACTTGGAGTCTCTCTCTCTAACGACCATACAAAATCTTAAACAATTAGAAAGGCTGAATTTGGAGCACACTCAAGTCATCAATGAAGCTTTATTCCCTTTATCAAGCTTCCAAGAGCTGAGATATTTATCTCTTAAAAGTCCTTCACTTGCAGACATCTCACTTTACCATCTATCATCAGTTCCCAAATTGACAAAGCTAAGTATCTGTGATGCGGTGTTGACAAATTATGCTCTTGGAAAGTTTAAGGTTCCTGAAACTCTCAAACTAATGGACCTCAGAGGTTGTTGGCTCTTAACAAAAGAAGCTATCTTATCATTCTGTAGAAATCATCCACAAATTGAAGTAAGGCATGAACTTGTTACGGTACTTCCCTTTGAAGAAAATGGACGTCATCATCATTCATCTCCATCTCGATTAACTTCAAGAACTATGCAAGCAACTAGGAAGAAAGAACAAACGTCCTTATCTCCATCTTTTGTAGATCAAAGGATGAAATATAGCAGAGATGAGTTACTTGCATTACAGTTTATGTCTTTGCCTCTTGCATCCAGTAGTGAGAGGGACAACTCAATACTTGAGAAGCAATTGGATTCAATGTGCAACTCGTCTGCATGA 1794 0.4002 MNNETELVQLCINAACKTKQTVDKWRLQRRSLDRIPSHLADALLRRLITRRLLHPSLLEVFKHSAEEIDLRGENAVDAEWMAYLGAFRHLRYLNIAECHRVNSSALWPTAGMNSLKELDLSRCAKINDSGINHILSISNLEKLHISKTGVTAKGIKLLASLKNLSLLDLGGLPVDDACLASLQVLENLQQIELWGSKVSNEGAALLNTFPKLTHLNLDWTSVTKLPNLSTLECLNMSNCTIDSILKDDKSPLTKLIFSGSKFLNEAETLLYANTNFLSFLDLAHTGLDKFFFLSKLKVIEHLNLSSCMMDDDSVEMVACIGGKLKSLNLSGTWVTSAGVGILAGHVPNLEILSLSQTSVDDTAFSFISMMPSLKDVDLSSTNIKGFLNQGSNDLESLSLTTIQNLKQLERLNLEHTQVINEALFPLSSFQELRYLSLKSPSLADISLYHLSSVPKLTKLSICDAVLTNYALGKFKVPETLKLMDLRGCWLLTKEAILSFCRNHPQIEVRHELVTVLPFEENGRHHHSSPSRLTSRTMQATRKKEQTSLSPSFVDQRMKYSRDELLALQFMSLPLASSSERDNSILEKQLDSMCNSSA 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03674 597 Gene3D Ribonuclease Inhibitor 152 388 IPR032675 -
Vifa6g03674 597 SUPERFAMILY RNI-like 67 384 - -
Vifa6g03674 597 Pfam Leucine Rich repeat 113 131 IPR001611 GO:0005515
Vifa6g03674 597 SMART LRR_CC_2 321 345 IPR006553 -
Vifa6g03674 597 SMART LRR_CC_2 112 137 IPR006553 -
Vifa6g03674 597 SMART LRR_CC_2 161 185 IPR006553 -
Vifa6g03674 597 SMART LRR_CC_2 477 502 IPR006553 -
Vifa6g03674 597 SMART LRR_CC_2 429 453 IPR006553 -
Vifa6g03674 597 MobiDBLite consensus disorder prediction 521 550 - -
Vifa6g03674 597 Gene3D Ribonuclease Inhibitor 23 150 IPR032675 -
Vifa6g03674 597 MobiDBLite consensus disorder prediction 531 550 - -
Vifa6g03674 597 ProSiteProfiles Leucine-rich repeat profile. 211 232 IPR001611 GO:0005515
Vifa6g03674 597 Gene3D Ribonuclease Inhibitor 389 549 IPR032675 -
Vifa6g03674 597 PANTHER - 341 512 - -
Vifa6g03674 597 SUPERFAMILY L domain-like 324 510 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03674 - - gmx:100814174 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03674 6 1208079032 1208090023 Vifa6g03674 6 1208079032 1208090023 ECH