Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03658 ATGGCAAATCCACCGAAGGAAACTCATCTTTCCGACGACGACGCCGGAGCCGCTTTCGTCCTTCAATCCAAAGGTCAATGGTGGCACGCCGGATTTCACTTAACGACGGCGATAGTTGGACCGACGATACTAACGCTGCCGTACGCGTTCAGAGGATTAGGGTGGTGGATTGGGATGTTATGCCTAACAGTTATGGGAGTTGTGACGTTCTACTCTTATGGCCTCATGTCTAAGGTTCTTGATCACTGTGAAAACGCCGGTCGCCGTCATATTCGGTTCCGGGAACTCGCCGCCGATGTCTTAGGTTCTGGCTGGATGTTCTATTTTGTAATCTTTATTCAAACGGCAATCAATACTGGCGTTGGCGTAGGGGCTATTCTGCTGGCTGGTGAATGCCTTCAGATTGTGTACTCCAATATTGCGCCTAATGGATCACTGAAATTGTACCACTTCATAGCAATGGTGACAGTGGTAATGATAGTTCTGTCTCAACTTCCCACTTTCCATTCCCTAAGACACATCAACTTGTGTTCACTTTTTCTCAGCTTAGCCTACACCTTCCTAGTAGTTGGTGCTTGTATTCATGCAGGTACATCCAAAAATGCCCCTCCAAGGGACTATTCCTTGGAACCCAAGAAATCGTCAAGGGCCTTCAGTGCTTTCACTGCCATATCCATAATTGCAGCAATATTTGGAAATGGAATATTACCTGAGATACAAGCAACTCTAGCACCTCCTGCAACTGGAAAGATGATAAAAGGCCTTACTATGTGTTATGCTGTGATTTTGGTGACATTCTACTCTGCTGCAGTTTCTGGATATTGGGTATTTGGAAACAAGTCCAATTCAAATATTTTGAAGAGTTTGCTGCCAGATGAAGGACCTTCTTTGGCTCCAACTTGGGTCCTTGGACTCGCCGTCATCTTTGTTCTTCTTCAGCTCTTTGCAATTGGTCTGGTTTATTCTCAAGTTGCTTACGAGATAATGGAGAAGAAATCAGCTGACGTGAAGCAAGGGATGTTTTCCAAGAGAAATCTTCTTCCACGCATAATTCTACGAACACTTTACATGATTTTCTGTGGATTTATAGCAGCCATGTTGCCATTTTTCGGAGACATAAATGGCGTGGTTGGTGCTGTTGGTTTCATTCCTCTGGATTTTGTTTTGCCTATGATTCTATACAACAAAACACACAAGCCTCCAAAATCATCATTGACTTACTTGATCAACATTTCAATCATGGTGGTATTCACTGGTGCAGGAATCATGGGAGCATTCTCTTCTATAAGAAAATTGGTTCTTGATGCAAACCAATTTAAGCTTTTTGGCAGTGATGTTGTGGATTGA 1347 0.4358 MANPPKETHLSDDDAGAAFVLQSKGQWWHAGFHLTTAIVGPTILTLPYAFRGLGWWIGMLCLTVMGVVTFYSYGLMSKVLDHCENAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGECLQIVYSNIAPNGSLKLYHFIAMVTVVMIVLSQLPTFHSLRHINLCSLFLSLAYTFLVVGACIHAGTSKNAPPRDYSLEPKKSSRAFSAFTAISIIAAIFGNGILPEIQATLAPPATGKMIKGLTMCYAVILVTFYSAAVSGYWVFGNKSNSNILKSLLPDEGPSLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYEIMEKKSADVKQGMFSKRNLLPRIILRTLYMIFCGFIAAMLPFFGDINGVVGAVGFIPLDFVLPMILYNKTHKPPKSSLTYLINISIMVVFTGAGIMGAFSSIRKLVLDANQFKLFGSDVVD 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03658 448 Pfam Transmembrane amino acid transporter protein 24 430 IPR013057 -
Vifa6g03658 448 PANTHER OS05G0424000 PROTEIN-RELATED 26 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03658 Vifa-Chr6 1203171333 1203183777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03658 1 448 Organic Solute Cotransporters AT5G41800 78.982 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03658 - - gmx:100815232 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03658 6 1203171333 1203183777 Vifa6g03658 6 1203171333 1203183777 ECH