Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03652 ATGAGGATCGATTCTTCTCTCAATTTCAACCACAAAAACTACTTCATCAAGTTACTTCTCACTGTTTTCTTCTCTGTCCTCGCTTTTCGTCTTCTCTTCTTTCACTCTCTTCCACCTCACATCGATGAACCTTTTCCTGACAAAATCATCGAACCTCAAAATGAAGAAGTTATTCAAAATGAAGAAGATAAAGTTTCTCCCACCGACACTGGAAAATGTGATTATTTTGATGGTGATTGGGTACGGAATCCGTTGGGCCCAATGTATACAAATGAAACTTGTGACCTAATTGAATCGCATCAAAATTGTATGAAAAATGGGAGACCTGATAGGGAGTTTTTGTATTGGAAATGGAATCCTAGGGATTGTGAGTTACCTATGTTTGATCCGAAGAGGTTTCTTGATATGATGCGTGGTAAAGTTTGGGGACTTATTGGTGATTCGATTTCTCGTAACCATGTTCAGTCTTTGCTCTGCATGCTTTCTAAGGTAGAAAAAGCTGTCCTTGTCTATCACGATGAGGAATACAAGTCCAAAAGCTGGAACTTTCCGTCGTACAACTTAACTATATCAGTTTTATGGTCACCGTTTCTTGCGGAAGCTGCTATTTTTGAAGACATAAATGGTGTTTCTAGTTCTGAGGTTGAGCTACATGTAGACAAACTGGATAGTAAATGGACGGATCAGTATCTAAACTTTGATTACATTATTATTTCAACTGGAAAATGGTTTGTCAAATCTGCAATCTACTATGAGAACAACACTATATTGGGCTGCCACTGGTGTACTAATAACAAGAACTATACAGAGGTAGGGTTCGACATTGCCTATCGCAAAGTCTTAAAAAATGTCATGGACTTCATATCGTCTTCCAATCACAAGGGCCAGATTTTGTTCAGGACATCAACACCCGACCATTTTGAAAACGGAGAGTGGTTTAGCGGAGGAACGTGCAACAGAACTGAGCCGATTAAAGAAGCTCAGGTGGAGATTAAGAATCTGCTCAGGATTATTCGCGACATTGAGTTAGAGGAGTTTCAAAAGGCGGCTTCTAAAGCTTCGAAAAACGGAGTTAATCTAAAGCTTCTTGATTTAGCGCCGCTTTCGCTTTTGAGACCGGACGGACATCCGGGTCCATACAGGCAGTTTCAGCCCTTTGCCAAGAACCAAAATGCTAAAGTTCAGACTGATTGTTTGCATTGGTGCTTACCTGGGCCAATAGATTCTTGGAACGATATAATAATGGAAATGGTTGTCAGTGGATGA 1266 0.4021 MRIDSSLNFNHKNYFIKLLLTVFFSVLAFRLLFFHSLPPHIDEPFPDKIIEPQNEEVIQNEEDKVSPTDTGKCDYFDGDWVRNPLGPMYTNETCDLIESHQNCMKNGRPDREFLYWKWNPRDCELPMFDPKRFLDMMRGKVWGLIGDSISRNHVQSLLCMLSKVEKAVLVYHDEEYKSKSWNFPSYNLTISVLWSPFLAEAAIFEDINGVSSSEVELHVDKLDSKWTDQYLNFDYIIISTGKWFVKSAIYYENNTILGCHWCTNNKNYTEVGFDIAYRKVLKNVMDFISSSNHKGQILFRTSTPDHFENGEWFSGGTCNRTEPIKEAQVEIKNLLRIIRDIELEEFQKAASKASKNGVNLKLLDLAPLSLLRPDGHPGPYRQFQPFAKNQNAKVQTDCLHWCLPGPIDSWNDIIMEMVVSG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03652 421 Coils Coil 324 344 - -
Vifa6g03652 421 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 30 414 IPR029962 GO:0016413
Vifa6g03652 421 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 125 417 IPR026057 GO:0016740
Vifa6g03652 421 Pfam PMR5 N terminal Domain 72 124 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03652 Vifa-Chr6 1201598418 1201601225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03652 - - gmx:100816814 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03652 6 1201598418 1201601225 Vifa6g03652 6 1201598418 1201601225 ECH