Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03644 ATGGTGAAACATCGCTTGAGAGAATCTATAAAATCGCTGTTTGGAAGTCATGTTGATCCTGATAAAGAAGAGCAGCTCCGAGGAGCTAAAACAGAATTTGATGACAAAGTGAAAAAGGTATTGAAACTTATTAAAGAGGACAACGGTGAAGAGGATGGTACCCCAGCAGAAATTTTGAAGAGGGGACAACTTGCTGAACTGATTGAGGATTTCCACGGTCAATACCAAACGCTCTATACAAAGTATGATCATCTGACAGGCGAGTTAAAGAAAAAAATCAAGGGCAAGAGAGAAAAAGGAAGTTTATCATCTAGTTCTTCATCTAGCTCTGGCTCGGATTCGGATTATTCTTCAAAGGACAGAGACAGCAAAAATGGACTTCTGCAAAATGAATTTCAAAAGATAAATGATGGATTGAAGCAAGAACTCGAAGAGGTGCACAAGGAAGTTGCTGAATTAAATCAGAAGTTGGCAATTACAAATGAAGAGAAGGAGGAAATAAATTCAAAACACGTAGCAGCACTTAACAAGATACAGGAAGCAAACAAAATTAATTTAGATTTGAAAACTGATGCCGATGCATTAGAGATTCAAAGAACAAAACTCTTGGCTGAGAATACTGAACTAAATAAGAAATTGGATATTGCTGGAAAAGTAGAAGCTGAACTGAGTCAAAGATTGGAGGATATGAAGACAGAAAACAATAGCTTAGCCAAGGAGAAAGAGACAGCTCTCCAACTGATTGACGAGGAAAAGAAGATTACAGATGACCTGAGAAACCTCATTGATCAGCTGAAAGAAGATAAGTTAGTGGCTGCGAAAGAATTACAAACAGTAACAGATGAACTTTCTACTCTGAAGCAGGAATTGAAACACTCAGAACAGCAAATAACAGCTCTTAGCAACAATCTGGAGGTCTCAAAAGAAGAAAATGGATCATTGAAAGCTGAACTTTCCCAGGCTTCAAATGAGGTTCAGCTGTCTCAAAGCAGAATACAAGAATTTCTAGCTGAATCAAGCCAGTTAAAGGAGAAACTTGATGAAAGAGAAAGAGAAGTTTCTACCCTCACTCAAATGCATGAAGGGCATCAGAATGAGTCCTCAAATCAAATCATTGAACTAGAAGCACAAATCTCAAATCTGGGGCTGGAACTAGAGTCACTGCGAAACCAGAAAAGGGATATAGAGGATCAATATCTAGCTGAATCAAGTCAGTTAAAAGAGAAACTTGATGAAAGAGAAAGAGAGGTTTCTACCCTCACTCAAATGCATGAAGGGCATCAGAATGAGTCCTCAAATCAAATCAAAGAATTAGAAGCACAAATCTCAAATCTGGGTGTGGAACTAGAGTCACTGCAAAACCAGAAAAGGGATATAGAGGATCAATATCTAGCTGAATCAAGTCAGTTAAAAGAGAAACTTGATGAAAGAGAAAGAGAAGTTTCTACCCTCACTCAAATGCATGAAGGGCATCAGAATGAGTCCTCAAATCAAATCAAAGAATTAGAAGTACAAATCTCAAATCTGGGTGTGGAACTAGAGTCACTGCAAAACCAGAAAAGGGATATAGAGGATCAATATCTAGCTGAATCAAGTCAGTTAAAAGAGAAACTTGATGAAAGAGAAAGAGAAGTTTCTACCCTCACTCAAATGCATGAAGGGCATCAGAATGAGTCCTCAAATCAAATCAAAGAATTAGAAGTACAAATCTCAAATCTGGGTGTGGAACTAGAGTCACTGCAAAACCAGAAAAGGGATATAGAGGATCAATATCTAGCTGAATCAAGTCAGTTAAAAGAGAAACTTGATGAAAGAGAAAGAGAAGTTTCTACTCTCACTCAAATGCATGAAGGGCATCAGAATGAGTCCTCAAATCAAATCAATGAATTAGAAGCACAAATCTCAAATCTGGGTCTGGAACTAGAGTCACTGCAAAACCAGAAAAGAGATATAGAGGATCAATATCAAGCTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGAAAGAGAAGTTTCAACCCTCACTCAAATGCATGAAGGGCATAAGAATGAGTCCTCAAATCAAATCAAAGAATTAGAAGCACAAATCTCAAATCTGCGGCTGGAACTAGAGTCACTGCTAAACCAGAAAAGAGATATAGAGGATCAATATCAAGCTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGAAAGAGAAGTTTCAACCCTCACTCAAATGCATGAAGGGCATAAGAATGAGTCCTCAAATCAAATCAAAGAATTAGAAGCACAAATCTCAAATCTGGGGCTGGAACTAGAGTCACTGCAAAACCAGAAAAGAGATATAGAGGATCAATATCAAGCTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGAAAGAGAAGTTTCAACCCTCACTCAAATGCATGAAGGGCATCAGAATGAGTCCTCAAATCAAATCAAAGAATTAGAAGCACAAATCTCAAATCTGGGGCTGGAACTAGAGTCACTGCAAAACCAGAAAAGAGATATAGAGGATCAATATCAAGCTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGAAAGAGAAGTTTCAACCCTCACTCAAATGCATGAAGGGCATAAGAATGAGTCCTCAAATCAAATCAAAGAATTAGAAGCACAAATCTCAAATCTGCGGCTGGAACTAGAGTCACTGCTAAACCAGAAAAGAGATATAGAGGATCAATATCAAGCTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGAAAGAGAAGTTTCAACCCTCACTCAAGTGCATGAAGGGCAGCAGAATGAGTCCTCAAATCAAATCAAAGAATTTGAAGCACAAATCTCAAATCTGGGGCTGGAACTAGAGTCACTGCGAAACCAAAAAAGAGATATAGAGGATCAATATCAAGCTGAATTAAGTCAGTTAAAGGAGATACTTGATGAGAGAGAAAGAGAAGTTTCAACCCTCACTCAAATGCATGAAGGGCATCAGAATGAGTCCTCAAATCAGATCAAGGAATTAGAAGCACAAATCTCAAATCTGGGGCTGGAACTAGAGTTACTGCGAAACCAAAAAAGAGATATAGAGGAGCAACTTAAGAGCTTTACCACAGAAGCAAGGGAACTGGGAGAACACAATTTAGGGTTGCAAAGCCAAATTTCGGAACTTGAAATGAAGTCCAAAGAAAGAGAAGAGGAACTATCTGCTATCTTGAAGAAACTCAAAGATAATGAGGATGAATCATCTTCAAAAATATCAGATTTGACATCTCAGATAAACAATTTGCAGGCTGATATTGGCTCATTACATGCTCAGAAAAATGAACAGGAAGAGCAAATAATTCTTAAAACTAATGAAGCTTCAACTCGAATTGAAAGCATTACAAATGAGATGAATGCACTGCAGCAGGAAGTGGAGTCTCTACAACACCAGAAATCTGACTTAGAAGCTCAGCTTGTGGAAAAAAGTCGAGAAAATTCTGAGTATATGATTCAAGTTCAAAGTCTGAAAGAGGAGGTTGACAGCAAAACCATGGAGCAAGAGAGACTTATGGAACACAGAGAAAATTTAACCACAGAAGCACGGGAACTGGGAGAGCACCATTTAGGGTTGCAAAACCAATATTCGGAACTTGAAATAAGGTCCAAAGCAAGAGAAGAGGAACTATCTGCTATCATGAAGAAACTCAAAGATAATGAGGATGAATCATCTTCCAAAATATCAGATTTGACATCTCAGATAAACAATTTGCAGGCTAATATAAGCTCATTACACGCTCAGAAAAATGAACTGGAAGAGCAAATGATTTTCAGAAGTAATGAAGCGTCAACTCGAATCGAAAGCATTACAAATGAGATGAATGTACTGCAGCAGGAAGTGGAGTCTCTACAACACCAGAAATCTGACTTGGAAGTTCAGCTCGAGGAAAAAAGCCGAGAAAATTCTGAGTGTACGATTCAAGTTCAAATTCTGAAAGAGGATATTGACAGAAAAACACTGGAACAAGAGAGACTAAAGGAAGATGGAGAAAATTTAACTACAAAAGCAAGGGAATTGGGAGAGCACAATTTAGGGTTGCAAAACCAAATTTCGGAACTTGAAATGAAGTCCAAAGAAAGAGAAGAGGAACTATCTGCTATCATGAAGAAACTCAAAGATAATGAGGATGAATCATCTTCCAAAATATCAGATTTGACATCTCAGCTAAACAATTTGCAGGCTGATATAAGCTCATTACATGCTCAGAAAAACGAACTGGAAAATCAAATAATTTTTAAAAGTAATGAAGCTTCAACTCAAATTGAAAGCATTACAAATGAGATGACTGTACTGCAGCAGGAAGTGGAGTCTCTACAACACCAGAAATCTGACTTGGAAGTTCAGCTTGTGGAAAAAAGCCAAGAAAATTCCGAGTTCTTGATTCAAGTTCAAAGTCTGAAAGAAGAGGTAGACAGAAAAACCCTGGAACAAGAGAAACTTATGGAACACAGAGAAAACTTAACCACAGAAGCAAGGGAGCTGGGAGAGCACCATTTAGGGTTGCGAAACCAATACTCGGAACTTGAAATAAGGTCCAAAGAAAGAGAAGAGGAACTATCTTCTCTCGTGAAGAAACTCAAAGATAATGAGGATGAATCATCTTCCAAAATATCAGATCTGACATCTCAAATAAACAATTTTCTGGCTGATATAAGCTCATTACATGCTGAGAAAAATGAACTGGAAAAGGACTTGCTTTCCTCGCAGAAAACAAAAGAAGAATTGGAGCTCTCCTGCAAAAAAGTAAAAGAAGAACATGTTGAAACCCTCTCAGTGGTTGACAATGAAAAGACCGAATTAGCCAACCAAAATATGGATCTTCAGAGAACATTGGAAGAACGTGAAGATGCATATCAGAAGTTGAATGAGGAATATAAAAAAGTTGAAAGTTGGTTTAATGAATGCAAGGTCAAACTTGAGGTTGCAGAGAGGAAGATGGAAGAAATGACAGAAGAGTTTCGTGAAGGCATTGGGTCAAAAGATCATATAGTAGGTGATTTGGAACACCAAGTTGAAGGCCTGAAAAGAGACCTGGAAGACAAAGGAGATGAGATCAGCACTTTGCTTGAAAATGTGAGGAATCTCGAGGTAAAGCTACGCATGTCAAACCAAAAGCTCCGGGTCACAGAACAATTGCAAAATGAAAACGAAGAAAAGTTTAAGCAAAAACAGAGTGCACTTGAAGATAGGATTGCTACATTCGTAGCAACAATCACAGCTAACAATGAAGCTTTTCATGAAACTATCACAACTATCAAAAAGTCTGTCAATAGTATGATATCTGGAATAGATACAGTGAGCAGAAAATTTTCGGACGAATGCAAAACTCACGAGAACAGCATCTCAAACATCTCACACGAGCTTCAGGTTGCAAAAGAATATGTTTGCGAGATCAATAGGATCAAGGGAAAGTTAGAGAAAGATAAAAACCGTTTGTTGGAGGAGTTGAAGGGTAAAAAGGAAGAGGAGTTAACTCTGTTGGAGGAGTTGAAGGATAAAAAGGAAGAGGAATTAATTCTGAAGGAGAAGGTTGAGAAGCTAGAAGCAAAGACAAGAAAGCAGGAATCTGAGAATATCAATGTGAAGGCAACTGTTGTTGAACTTAAGAAGACAGTTGAAGAGCTAGAGAAGTTGATCAAAGAGAAAGAGGAAGGTTTGGGAGAGGAAAAGAGGGATGCCATTAGGCAGCTCTGTTTGTGGATTGATTATCACAGGGAGCGTAATGACTATCTCAAGGAAATCCTATCAAAAACTCGCAGGGTCCAGAGAGCAGCAGTGTAG 5841 0.3816 MVKHRLRESIKSLFGSHVDPDKEEQLRGAKTEFDDKVKKVLKLIKEDNGEEDGTPAEILKRGQLAELIEDFHGQYQTLYTKYDHLTGELKKKIKGKREKGSLSSSSSSSSGSDSDYSSKDRDSKNGLLQNEFQKINDGLKQELEEVHKEVAELNQKLAITNEEKEEINSKHVAALNKIQEANKINLDLKTDADALEIQRTKLLAENTELNKKLDIAGKVEAELSQRLEDMKTENNSLAKEKETALQLIDEEKKITDDLRNLIDQLKEDKLVAAKELQTVTDELSTLKQELKHSEQQITALSNNLEVSKEENGSLKAELSQASNEVQLSQSRIQEFLAESSQLKEKLDEREREVSTLTQMHEGHQNESSNQIIELEAQISNLGLELESLRNQKRDIEDQYLAESSQLKEKLDEREREVSTLTQMHEGHQNESSNQIKELEAQISNLGVELESLQNQKRDIEDQYLAESSQLKEKLDEREREVSTLTQMHEGHQNESSNQIKELEVQISNLGVELESLQNQKRDIEDQYLAESSQLKEKLDEREREVSTLTQMHEGHQNESSNQIKELEVQISNLGVELESLQNQKRDIEDQYLAESSQLKEKLDEREREVSTLTQMHEGHQNESSNQINELEAQISNLGLELESLQNQKRDIEDQYQAESSQLKEKLDEREREVSTLTQMHEGHKNESSNQIKELEAQISNLRLELESLLNQKRDIEDQYQAESSQLKEKLDEREREVSTLTQMHEGHKNESSNQIKELEAQISNLGLELESLQNQKRDIEDQYQAESSQLKEKLDEREREVSTLTQMHEGHQNESSNQIKELEAQISNLGLELESLQNQKRDIEDQYQAESSQLKEKLDEREREVSTLTQMHEGHKNESSNQIKELEAQISNLRLELESLLNQKRDIEDQYQAESSQLKEKLDEREREVSTLTQVHEGQQNESSNQIKEFEAQISNLGLELESLRNQKRDIEDQYQAELSQLKEILDEREREVSTLTQMHEGHQNESSNQIKELEAQISNLGLELELLRNQKRDIEEQLKSFTTEARELGEHNLGLQSQISELEMKSKEREEELSAILKKLKDNEDESSSKISDLTSQINNLQADIGSLHAQKNEQEEQIILKTNEASTRIESITNEMNALQQEVESLQHQKSDLEAQLVEKSRENSEYMIQVQSLKEEVDSKTMEQERLMEHRENLTTEARELGEHHLGLQNQYSELEIRSKAREEELSAIMKKLKDNEDESSSKISDLTSQINNLQANISSLHAQKNELEEQMIFRSNEASTRIESITNEMNVLQQEVESLQHQKSDLEVQLEEKSRENSECTIQVQILKEDIDRKTLEQERLKEDGENLTTKARELGEHNLGLQNQISELEMKSKEREEELSAIMKKLKDNEDESSSKISDLTSQLNNLQADISSLHAQKNELENQIIFKSNEASTQIESITNEMTVLQQEVESLQHQKSDLEVQLVEKSQENSEFLIQVQSLKEEVDRKTLEQEKLMEHRENLTTEARELGEHHLGLRNQYSELEIRSKEREEELSSLVKKLKDNEDESSSKISDLTSQINNFLADISSLHAEKNELEKDLLSSQKTKEELELSCKKVKEEHVETLSVVDNEKTELANQNMDLQRTLEEREDAYQKLNEEYKKVESWFNECKVKLEVAERKMEEMTEEFREGIGSKDHIVGDLEHQVEGLKRDLEDKGDEISTLLENVRNLEVKLRMSNQKLRVTEQLQNENEEKFKQKQSALEDRIATFVATITANNEAFHETITTIKKSVNSMISGIDTVSRKFSDECKTHENSISNISHELQVAKEYVCEINRIKGKLEKDKNRLLEELKGKKEEELTLLEELKDKKEEELILKEKVEKLEAKTRKQESENINVKATVVELKKTVEELEKLIKEKEEGLGEEKRDAIRQLCLWIDYHRERNDYLKEILSKTRRVQRAAV 1946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03644 1946 Coils Coil 1684 1725 - -
Vifa6g03644 1946 Coils Coil 1233 1274 - -
Vifa6g03644 1946 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Vifa6g03644 1946 Coils Coil 1525 1605 - -
Vifa6g03644 1946 Coils Coil 220 366 - -
Vifa6g03644 1946 Coils Coil 178 212 - -
Vifa6g03644 1946 Coils Coil 129 170 - -
Vifa6g03644 1946 Coils Coil 1356 1503 - -
Vifa6g03644 1946 Coils Coil 1652 1672 - -
Vifa6g03644 1946 Coils Coil 947 1119 - -
Vifa6g03644 1946 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Vifa6g03644 1946 Coils Coil 1729 1749 - -
Vifa6g03644 1946 Coils Coil 371 494 - -
Vifa6g03644 1946 Coils Coil 1613 1647 - -
Vifa6g03644 1946 MobiDBLite consensus disorder prediction 93 127 - -
Vifa6g03644 1946 PANTHER COP1-INTERACTIVE PROTEIN 1 1505 1584 - -
Vifa6g03644 1946 Coils Coil 1124 1193 - -
Vifa6g03644 1946 Gene3D - 1610 1770 - -
Vifa6g03644 1946 Gene3D - 1086 1249 - -
Vifa6g03644 1946 Gene3D - 1396 1560 - -
Vifa6g03644 1946 Coils Coil 1822 1912 - -
Vifa6g03644 1946 Coils Coil 563 935 - -
Vifa6g03644 1946 MobiDBLite consensus disorder prediction 100 114 - -
Vifa6g03644 1946 Coils Coil 1279 1348 - -
Vifa6g03644 1946 Coils Coil 499 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03644 Vifa-Chr6 1200659496 1200665487 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03644 - - psat:127108248 2087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03644 6 1200659496 1200665487 Vifa6g03644 6 1200659496 1200665487 ECH