Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03597 ATGAAGAAAGTGGTGGTGAAGTTGGATTTGCATGATGATAAAGCAAAACAGAAGGCCATGAAATCAGTTTCTAGCCTTTCAGGCATTGATTCTATCGCCATGGACATGAAAGAGAAGAAGCTGACAGTGGTTGGTGATATAGATCCTGTGGATGTTGTGAGCAAATTGAGAAAATGGCACACAGAGATTTTAACGGTCGGGCCGGCGAAAGAGCCGGAGAAGAAGAAAGATGATGGAAAAAAAGATGATAACAAGAAGAAAGATGATGATAAGAAGAAAGATCCAAATGAACAAATTGCTGAGCTTGTTAAGCAATATAGAGCATATAATCCTTACATGACTACATATTATCATGTTCAGAGTGTTGAAGAGAATCCAAATGCTTGTGTTATTTGTTGA 399 0.381 MKKVVVKLDLHDDKAKQKAMKSVSSLSGIDSIAMDMKEKKLTVVGDIDPVDVVSKLRKWHTEILTVGPAKEPEKKKDDGKKDDNKKKDDDKKKDPNEQIAELVKQYRAYNPYMTTYYHVQSVEENPNACVIC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03597 132 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 129 - -
Vifa6g03597 132 MobiDBLite consensus disorder prediction 67 98 - -
Vifa6g03597 132 ProSiteProfiles Heavy-metal-associated domain profile. 1 67 IPR006121 GO:0046872
Vifa6g03597 132 SUPERFAMILY HMA, heavy metal-associated domain 1 63 IPR036163 GO:0046872
Vifa6g03597 132 Gene3D - 1 71 - -
Vifa6g03597 132 Pfam Heavy-metal-associated domain 6 58 IPR006121 GO:0046872
Vifa6g03597 132 MobiDBLite consensus disorder prediction 65 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03597 Vifa-Chr6 1181505432 1181506536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03597 - - gmx:100527826 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03597 6 1181505432 1181506536 Vifa6g03597 6 1181505432 1181506536 ECH