Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03594 ATGCCTGCAACAACAGAGAACAATCAAAGCTCATTTTTGGGAAGAATAAGCATTCGAAGAAACCAAGTAATGTCAATGGAAGGTAACCACGATCAAGAGCTAGAAGACCTTGAACTTTTCCAAAAACACGTCGGTGATAGATTCGCCGACCTATTATCTTCCACAACAGAAGATCCTTCGAGCGACGCTCTTCTATCTATCGGTTGGTTGAGAAAGCTTCTGGATGAACTTCTTTGTTGCGAAGCTGAATTCAAAGCCGTTGTTATGATGGGTCGTGACCCTTCTCAAATCTCCAAACCGCCTCTCGACAAACTCCTCCCGGAACTCCTTGACCGTGTCGTCAAATCGCTTGACGTTTGCAATGCTGTAACTCTTGGTCTCGATGCTATTAGGAACCTCCAGAGGCTCGCTGAGATCGCTGTTGTTGCTCTTGAACCTAGACCCATGGGTGATGGACAAGTCCGGAGGGCCAAAAAAGCACTTCATTCTCTTGTTACTGTAATGGTGCATGAAGATAAAGAATGTGGTAGTACCAAGGGAACTGAGAGAAGCAGGTCATTTGGAAGAAGAGGAGGGAATGCTGGGAATAAGGATAGAGTAAGATCGCTATCATGGACAATGGCAAGAAATTGGTCTGCTGCAAAACAAATCCACGCCATGTCATCAAATTTGGCTGCGCCACGTGGTGGTGATTTAACGGGTTTGGCTTTGCCACTTTACATAATGAGTACTGCATTGGTTTTTGTCATGTGGACTCTTGCTGCCGCGATTCCTTGTCAAGAAAGGAACGGCTTGGGCACTCATTTACCCTTTCCGAGGCAATTGCCTTGGGCGCAACCCATGATTGGTTTGCAAGAGAAGATTGCTGAGGAGTGGAAGAAGAAGGAGAAGAAAGGCTCTGTTGGATTGTTGGAAGAGATGCAAAAGATGGAAAAGGTGGGGCAATTGCTTATTGAATTTGCTGACTCTTTTCAGTTTCCTGCTGAAAATGAGCGTTTGGATGAGGTCAGGGTGCATGTGGAAGAATTGGCTGATATTTGTAGGAAGATGGAAGAAGGCTTGGAACCTTTGCAATTGCAGATTAGAGAGGTTTTTCACAGGCTTGTTAGGACCAGGACTGAGTTTCTTCATGTTTTGGACCAAGCTGGAAAATTGTCTACACCTACTGTGTAA 1173 0.4518 MPATTENNQSSFLGRISIRRNQVMSMEGNHDQELEDLELFQKHVGDRFADLLSSTTEDPSSDALLSIGWLRKLLDELLCCEAEFKAVVMMGRDPSQISKPPLDKLLPELLDRVVKSLDVCNAVTLGLDAIRNLQRLAEIAVVALEPRPMGDGQVRRAKKALHSLVTVMVHEDKECGSTKGTERSRSFGRRGGNAGNKDRVRSLSWTMARNWSAAKQIHAMSSNLAAPRGGDLTGLALPLYIMSTALVFVMWTLAAAIPCQERNGLGTHLPFPRQLPWAQPMIGLQEKIAEEWKKKEKKGSVGLLEEMQKMEKVGQLLIEFADSFQFPAENERLDEVRVHVEELADICRKMEEGLEPLQLQIREVFHRLVRTRTEFLHVLDQAGKLSTPTV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03594 390 Pfam Protein ROH1-like 6 379 IPR008511 -
Vifa6g03594 390 PANTHER BPS1-LIKE PROTEIN 13 379 - -
Vifa6g03594 390 MobiDBLite consensus disorder prediction 175 196 - -
Vifa6g03594 390 MobiDBLite consensus disorder prediction 175 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03594 Vifa-Chr6 1180993437 1180994690 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03594 - - psat:127107055 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03594 6 1180993437 1180994690 Vifa6g03594 6 1180993437 1180994690 ECH