Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03548 ATGACAAGAGTTAACAGGAATCATGGACGAGATTCCAACAACAACAATAGCAACACTTTTGATACTATAAACGCGGCTGCTTTTGCTATAGCTTCTTCTCCTAATCGCGTTTCTCAATCTGTTAATCAGAAGAAAAAATGGGGAAACTGGTTGAACATAACCGGTTGTTTTGGATATCAAAAGAACAACCGAAAGCGCATTGGACATGCTGTTCTTGTTCCAGAAACAACAAGTGCTGGATCAGATGCAGCTGCTGCTGCTAATGCTAATGCTGTTAGTTCAACAGCTCAAGCGCCACCGAGTATAACACTTCCTTTCATTGCTCCTCCTTCGTCTCCGGCGTCATTCTTTCAATCCGAACCTCCTTCAACCGCGCAATCACCGGTTGGTTTAGTTTCTAAAACTTCTGTGTCTGCAAGCATGTACTCGCCTGGCGGGCCTAACTCAATCTTTGCCGTGGGGCCTTACGCGCACGAAACGCAATTAGTTTCACCTCCTGTTTTCTCGGCTTCGTCAACTGCTCCTTTCACTCCACCTCCTGAGTCTCTCCAATTGACCACGCCTTCTTCGCCTGAGGTTCCGTTTGCGCAGCTATTTGACTCCAATAACAGAAACTCTGAGACTTATCAGAGGTTCCAAATATCTCATTATGACTTTCAGAATTATCAGTTTCAACCTGGAAGCCCAGTTGGTCCGTTGATATCACCAAGATCCGCGATCTCGGTGTCTGGTACCTCGTCTCCTTTGCCGGATGAGTTTCAAACAGCAGACACTGCTAAGCTTCTTAAACTGGATAAGCTCTCAACTTATGGAAAACAGAAGTCAAGTCAAAGTTCTGGGTCTATTACACCAGATACTGTAAAATCCACTACTACTCAAGCTGGTTTTCATCCAAGTAATTGGGTTTCTGATATCAAAATCTCCCCTTGTCCAATCAATAACCGCAGAAATGAGATTAGCGTAAATCATAGGGTCTCATTTGAGTTATCCGCCGCTGTGGAAAACAAGCCAACAGCATCATCATCATCATCATCAGCATGGACTAAAGTTCTATCGAAATTTAAAAGCGATGCAGCAGCATCTGCATCAACAACAGGCAAAGAAGACAATGACTGTGATGACAAACAAGTTGTGACAGAAACTCTTATTGACGCGCAGAAGCAAACAAAAGCCGCTTTGGTTGAAGATGATGCAACAGTTCATGAGAAGGATCAATCATTAACCCTTTCTTCGTCTTCAACGAAAGAATTCAATTTCGACAGTGCAGATGGAGGAGATTCTCATGCACCAAATGTAGTTGCTGATTGGTGGGCTAATGAGAAAGTTGCAGGGAAGGAAGGAGGGGCCTCGAAGAATTGGTCTTTCTTCCCAATTATTCAACCTGGTGTTAGCTAG 1395 0.4387 MTRVNRNHGRDSNNNNSNTFDTINAAAFAIASSPNRVSQSVNQKKKWGNWLNITGCFGYQKNNRKRIGHAVLVPETTSAGSDAAAAANANAVSSTAQAPPSITLPFIAPPSSPASFFQSEPPSTAQSPVGLVSKTSVSASMYSPGGPNSIFAVGPYAHETQLVSPPVFSASSTAPFTPPPESLQLTTPSSPEVPFAQLFDSNNRNSETYQRFQISHYDFQNYQFQPGSPVGPLISPRSAISVSGTSSPLPDEFQTADTAKLLKLDKLSTYGKQKSSQSSGSITPDTVKSTTTQAGFHPSNWVSDIKISPCPINNRRNEISVNHRVSFELSAAVENKPTASSSSSSAWTKVLSKFKSDAAASASTTGKEDNDCDDKQVVTETLIDAQKQTKAALVEDDATVHEKDQSLTLSSSSTKEFNFDSADGGDSHAPNVVADWWANEKVAGKEGGASKNWSFFPIIQPGVS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03548 464 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 16 464 IPR040420 -
Vifa6g03548 464 MobiDBLite consensus disorder prediction 272 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03548 Vifa-Chr6 1167089922 1167091782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03548 - - gmx:100791666 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03548 6 1167089922 1167091782 Vifa6g03548 6 1167089922 1167091782 ECH