Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03523 ATGTTTGATTCAATTGCTGCAACTTTGATTCTGGGTTACCGTCCGGTTTGCGGTGGGAATTTGATTAGGGATGTGAATGGAAAGAGGAAATCTTTCAATACTTGCAGGTTTCCACCAGGTGAGTTTCTTGGTGGAAAGGTTGTTGTTTCACTGCCTTTGGTTAAATCAAAGCGAGATGGGTTCTTGTTGGCTTCGTCAATTAAGGCTCTTGCGGTGGAGCTTACGAGAGAAGTCTATGCGTATAGGGAGGATAGATTGCCAAAGAAAGGGAATAGTAAGATTGACAGTGGTTTTGATCGAAGGCCTGATTTGTGGCCACCGGAGAATCGAGCGGATAAGCCTTCGCTGAGAAACCCGTTGCTTAGACAGGAGAGGATGGGATGTGGTTGGTTGGGGGCTATATTTGAGTGGGAGGGGGTTCTCATTGAAGATAACCCGGATTTAGAGAAACAAGCTTGGCTTGCACTTGCGCAAGAGGAAGGAAAACCGTCTCCTATGGCTTTTGTGATCAAGAGAATTGAAGGTATGAAGAGTGAACAGGCGATTTCGGAAGTGTTGTGTTGGTCTAGGGACCGGACTGAGCTGAGAAGAATGGCGAATAGAAAGGAAGAAATCTACCAAGCTTTGCAAGGTGGGATTTATAGTTTCATGCCTGGGTCGAAAGAGTTTGTCGGTGTTTTGATGCATTATAAGATACCGATGGCTTTGGTTTCTACGCGGCCTAGAAAAGTTATCGAGTTTGCTATGGGGGAAATTGGCATAGTAGGAAACTTCAATGTTATTGTTGCGGCCGAGGATGTTCACAGGGGAAAGCCTGATCCTGAGATGTTTGCGTATGCAGCTCAGCTTTTGAACTTCATACCTGAAAGGTGCATTGTGTTTGGAAACTCAAATCTAACAGTGGAGGCAGCACATGATGCACAGATGAAGTGTGTTGCTGTTGCTAGCAAGCATCCCGTGTACGAGCTTCGGGCTGCAGACTTGGTTGTGAGGCGCTTGGATGAGCTTTCAGTGGTTGATTTGAAGAAATTGGCAGACATTGAGACATCTGAATTTGGGTCACCACAGCCTCAGATGGAGTTGGAAGAATCATCTGATGACGACAATTTCTGGTAA 1116 0.457 MFDSIAATLILGYRPVCGGNLIRDVNGKRKSFNTCRFPPGEFLGGKVVVSLPLVKSKRDGFLLASSIKALAVELTREVYAYREDRLPKKGNSKIDSGFDRRPDLWPPENRADKPSLRNPLLRQERMGCGWLGAIFEWEGVLIEDNPDLEKQAWLALAQEEGKPSPMAFVIKRIEGMKSEQAISEVLCWSRDRTELRRMANRKEEIYQALQGGIYSFMPGSKEFVGVLMHYKIPMALVSTRPRKVIEFAMGEIGIVGNFNVIVAAEDVHRGKPDPEMFAYAAQLLNFIPERCIVFGNSNLTVEAAHDAQMKCVAVASKHPVYELRAADLVVRRLDELSVVDLKKLADIETSEFGSPQPQMELEESSDDDNFW 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03523 371 MobiDBLite consensus disorder prediction 351 371 - -
Vifa6g03523 371 NCBIfam HAD-IA family hydrolase 201 314 IPR006439 -
Vifa6g03523 371 CDD HAD_BPGM-like 194 316 - -
Vifa6g03523 371 SUPERFAMILY HAD-like 133 336 IPR036412 -
Vifa6g03523 371 Pfam Haloacid dehalogenase-like hydrolase 146 314 IPR041492 -
Vifa6g03523 371 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 2 367 - -
Vifa6g03523 371 MobiDBLite consensus disorder prediction 92 113 - -
Vifa6g03523 371 Gene3D Putative phosphatase; domain 2 143 216 IPR023198 -
Vifa6g03523 371 Gene3D - 133 331 IPR023214 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03523 K22912 - gmx:100798181 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03523 6 1159668389 1159669504 Vifa6g03523 6 1159668389 1159669504 ECH