Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03522 ATGGCTACTGTCTTCCGAGTCGCTTCCTCCTCCCCCGCTCCTCCTCCGCCGCATAACTTCCGTCTACGGAAAACTTCCGTTTCCGACGTTTCTAACGGTTTCGCTTTCCCGTCAATTTGTTCTGACAGGAGAATTGTTAGCTCCGGTGGCCGTAGATTGATTGTTGCTGCTAGTCCACCAACTGACGATGCTGTCGTCGCTACTGAACCGCTTACGAAACAGGATCTCATCGATTATCTCGCCTCTGGTTGTAAACCAAAGGATAAATGGAGAATAGGTACTGAACATGAAAAGTTTGGCTTTGAGCTTGGAAGCTTGCGTCCTGTGAAGTATGAACAAATAGCAGAACTGCTGAATGCCATTGCCGAGAGATTTGACTGGGAAAAAATAATGGAAGGTGATAACATTATTGGACTCAAACAGGGGAAGCAAAGCATATCATTGGAGCCAGGTGGTCAGTTTGAACTTAGTGGAGCCCCTCTTGAAACCCTCCATCAAACTTGTGCTGAAGTTAATTCGCACCTCTATCAAGTAAAAGCTGTTACTGAAGAAATGGGAATTGGATTTCTGGGGATTGGTTTCCAGCCAAAGTGGGAGCGCAAAGATATACCTATGATGCCAAAGGGAAGATATGAGATTATGAAAAAATACATGCCCAAAGTTGGTTCTCTTGGGCTTGACATGATGTTCAGGACATGCACTGTACAGGTCAATCTGGACTTTAGTTCTGAAGCTGACATGATCAGGAAATTTCGTGCTGGTCTAGCTTTGCAGCCTATAGCAACAGCTCTTTTTGCAAATTCACCTTTCACAGAGGGAAAGCCCAATGGGTTTGTCAGTATGAGAAGTCATATTTGGACTGATACTGACAAGGATCGCACAGGCATGCTGCCTTTTGTTTTCGACGACTCTTTCGGGTTTGAGCAGTACGTTGATTATGCTCTTGATGTTCCAATGTATTTTGCATATCGGAAAAAGAAATATATCGACTGTACTGGAATGACCTTCAGGGACTTTTTGGCAGGAAAGCTTCCTAGTATTCCTGGTGAATTACCGACTCTTAATGATTGGGAGAATCATTTAACCACTATATTTCCCGAGGTCAGGCTAAAGAGGTATTTAGAGATGAGAGGGGCTGACGGAGGGCCTTGGAGAAGGTTGTGTGCTTTACCAGCATTTTGGGTAGGTTTATTGTACGATGAGGTTTCTTTGCAGCGTGTTTTGGATTTGACAGCAGATTGGACTTTAGAAGAAAGAGAAATGCTAAGGAATAAGGTCACTGTAACCGGTCTAAAGACACCATTTCGAGATGGTTTGCTGAAGCATGTCGCTGAAGAGGTTCTAGAGTTGGCAAAGGATGGCTTGGAAAGAAGAGGCTTTAAGGAATCGGGATTTTTAAATGCGGTAGCTGAGGTGGTTAGAACAGGTGTCACTCCAGCTGAGAGGCTTTTGGAATTGTATCATGGAAAGTGGGAGCAATCTGTAGATCATGTATTTGAGGAATTGCTTTATTAA 1515 0.4396 MATVFRVASSSPAPPPPHNFRLRKTSVSDVSNGFAFPSICSDRRIVSSGGRRLIVAASPPTDDAVVATEPLTKQDLIDYLASGCKPKDKWRIGTEHEKFGFELGSLRPVKYEQIAELLNAIAERFDWEKIMEGDNIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVTEEMGIGFLGIGFQPKWERKDIPMMPKGRYEIMKKYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFAYRKKKYIDCTGMTFRDFLAGKLPSIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQRVLDLTADWTLEEREMLRNKVTVTGLKTPFRDGLLKHVAEEVLELAKDGLERRGFKESGFLNAVAEVVRTGVTPAERLLELYHGKWEQSVDHVFEELLY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03522 504 MobiDBLite consensus disorder prediction 1 21 - -
Vifa6g03522 504 PIRSF GCL 59 504 IPR035434 GO:0004357|GO:0006750
Vifa6g03522 504 FunFam Glutamate--cysteine ligase 56 504 - -
Vifa6g03522 504 NCBIfam glutamate--cysteine ligase 70 504 IPR011556 GO:0004357|GO:0006750
Vifa6g03522 504 Gene3D - 56 504 - -
Vifa6g03522 504 Pfam Glutamate-cysteine ligase family 2(GCS2) 111 412 IPR006336 GO:0004357|GO:0042398
Vifa6g03522 504 SUPERFAMILY Glutamine synthetase/guanido kinase 82 502 IPR014746 GO:0003824
Vifa6g03522 504 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 47 504 IPR035434 GO:0004357|GO:0006750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03522 K01919 - gmx:547545 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03522 6 1159229015 1159235604 Vifa6g03522 6 1159229015 1159235604 ECH