LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa6g03516	ATGGCCACCGAAACCAGCAACGACCCAAAATCCGTCTACGATTTCACTCTCAAGGATGCTAAGGGGAATGATCTAGATCTTGCTACTTACAAGGGAAAAGTTCTTCTCATTGTTAATGTTGCTTCCAAATGTGGCATGACCAATTCAAATTATGTGGAGTTGAATCAACTATATGACAAGTACAAACTAAAAGGTTTGTATTGCTTTGAGATTCTGGCATTTCCAAGTAATCAATTTGGTGAGGAAGAACCTGGAACCAATGATCAAATATTGGATTTCGTCTGCACCCGCTTCAAATCAGAATTCCCCATCTTTGATAAGATTGAAGTGAATGGAGAGAACTCTGCTCCCTTGTATAAATTTTTAAAGTCAGGTAAATGGGGAATTTTTGGAGATGATATTCAGTGGAACTTTGCAAAGTTTCTAGTTGACAAGGATGGCCAAGTAGTGGACCGATACTATCCCACAACCTCTCCTCTTAGCCTTGAGAGAGACATCTCTAAACTACTTGGTGTTGAATGA	522	0.3946	MATETSNDPKSVYDFTLKDAKGNDLDLATYKGKVLLIVNVASKCGMTNSNYVELNQLYDKYKLKGLYCFEILAFPSNQFGEEEPGTNDQILDFVCTRFKSEFPIFDKIEVNGENSAPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDISKLLGVE	173

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa6g03516	173	PIRSF	Glutathion_perox	1	172	IPR000889	GO:0004602\|GO:0006979
	Vifa6g03516	173	Pfam	Glutathione peroxidase	12	123	IPR000889	GO:0004602\|GO:0006979
	Vifa6g03516	173	ProSitePatterns	Glutathione peroxidases signature 2.	72	79	IPR029760	-
	Vifa6g03516	173	ProSitePatterns	Glutathione peroxidases active site.	32	47	IPR029759	-
	Vifa6g03516	173	PANTHER	GLUTATHIONE PEROXIDASE	5	170	IPR000889	GO:0004602\|GO:0006979
	Vifa6g03516	173	CDD	GSH_Peroxidase	11	166	IPR000889	GO:0004602\|GO:0006979
	Vifa6g03516	173	Gene3D	Glutaredoxin	1	172	-	-
	Vifa6g03516	173	PRINTS	Glutathione peroxidase family signature	134	143	IPR000889	GO:0004602\|GO:0006979
	Vifa6g03516	173	PRINTS	Glutathione peroxidase family signature	30	47	IPR000889	GO:0004602\|GO:0006979
	Vifa6g03516	173	ProSiteProfiles	Glutathione peroxidase profile.	2	173	IPR000889	GO:0004602\|GO:0006979
	Vifa6g03516	173	FunFam	Glutathione peroxidase	3	172	-	-
	Vifa6g03516	173	SUPERFAMILY	Thioredoxin-like	11	170	IPR036249	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa6g03516	Vifa-Chr6	1157314479	1157316639	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa6g03516	K00432		-	jre:109014460	299.286

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa6g03516	6	1157314479	1157316639	Vifa6g03516	6	1157314479	1157316639	ECH