Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03494 ATGGCCAAAATCTACCCTAATCAAGAATCCACAACATCATCTCAGTCTCATGATGATGATCAGTGTGTCAGTAATAAAGGTGAAAGATATACAGTATGGATGAAATCACTAGTTGTTCAGTCAAATGGTTGCACGGTGTATGATTCAAATGGTAAGATTGTTTATAGAGTAGACAACTATGATAGAAAGGGTGGAAGAGAAGTGAATCTGATGGATCTAAAAGGGAATGTTGTGTGTACCATCAAAAAGAGATTACTAGCTTTTCGATGTTGGGAAGGACACAAAGAGGAGCAACCATGGTTTCAAGTTAAAAGATGTTTTACAGGAAAAATAGGTTGCACCATTAAAGTGGGATCACAAGAATTGTGCATAGAAAGAATGAGTATTGGAAAATCATTTGGTTTTCGGATGGTAAACAAAAACGGAGGAATCATAGCAGAGGCAAAGCAAAAACACTCTTCATCAGGGATTCTTCTCAGTAATGATGTTCTAACTTTGGATTTGGAAGCTGGGACAGATCATTCTCTTATAATGGCTTTGATTACAGTATACGGACTCATATGCCGAAAAATGTAG 576 0.3698 MAKIYPNQESTTSSQSHDDDQCVSNKGERYTVWMKSLVVQSNGCTVYDSNGKIVYRVDNYDRKGGREVNLMDLKGNVVCTIKKRLLAFRCWEGHKEEQPWFQVKRCFTGKIGCTIKVGSQELCIERMSIGKSFGFRMVNKNGGIIAEAKQKHSSSGILLSNDVLTLDLEAGTDHSLIMALITVYGLICRKM 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03494 191 MobiDBLite consensus disorder prediction 1 23 - -
Vifa6g03494 191 MobiDBLite consensus disorder prediction 1 20 - -
Vifa6g03494 191 Gene3D - 19 191 IPR038595 -
Vifa6g03494 191 Pfam LURP-one-related 18 183 IPR007612 -
Vifa6g03494 191 PANTHER - 29 188 IPR007612 -
Vifa6g03494 191 SUPERFAMILY Tubby C-terminal domain-like 19 188 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03494 Vifa-Chr6 1151423568 1151424143 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03494 - - tpra:123915970 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03494 6 1151423568 1151424143 Vifa6g03494 6 1151423568 1151424143 ECH