Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03454 ATGGCTGACTGGGGTCCGGTGATCATAGCGGTGGTGCTGTTCGTGATTCTGTGTCCAGGTCTGCTGTTTCAAATACCAGGAAGAGGAAGAATAATCGAGTTCGGGAACATGCAAACAAGCGGTGCTTCCATTCTTGTTCACGCCATCATTTACTTTGGACTCATCACTATTCTACTCATCGCCATTGGCGTTCACATCTACACCGGAGCCATTACCTCGGAACAATTCCTTCTGGCAGAATTTTACCGTGTGCTAAGAGCCATTGAAATTGTATTTGAAAAAGGATGGTTAAATCTTTAA 300 0.4467 MADWGPVIIAVVLFVILCPGLLFQIPGRGRIIEFGNMQTSGASILVHAIIYFGLITILLIAIGVHIYTGAITSEQFLLAEFYRVLRAIEIVFEKGWLNL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03454 99 PANTHER OS05G0103400 PROTEIN 1 69 IPR021775 -
Vifa6g03454 99 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03454 Vifa-Chr6 1139794678 1139820395 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03454 - - atri:130799940 129.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03454 6 1139794678 1139820395 Vifa6g03454 6 1139794678 1139820395 ECH