Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03426 ATGCCGGAAGAGGAGTTGGTTGATATCAAGTTTAGGTTGTACGATGGTTCTGATATTGGACCGTTTCGCTATTCTTCTGCTGCTACTGTTGATATGCTCAAGCAAAGGATTGTCTCTGATTGGCCTAAAGGCAAAACACTCCTGCCAAAGTCAGCAAATGAAGTGAAATTGATTAGTTCTGGTAAAATCTTGGAAAACAACAAGACTGTTGGTCAGTGTAAAGCACCATTTGGTGATATTGCAGGGGGAGTTATAATCATGCATGTTGTTGTACAGCCATCTCTAGCAAAATCTAAAGCTGAAAAGAAGATTGATGATTCATCCAAGAAGGTTGTTTGTTCCTGTTCTATATTGTGA 357 0.395 MPEEELVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTLLPKSANEVKLISSGKILENNKTVGQCKAPFGDIAGGVIIMHVVVQPSLAKSKAEKKIDDSSKKVVCSCSIL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03426 118 CDD Ubl_MUBs_plant 6 93 - -
Vifa6g03426 118 ProSiteProfiles Ubiquitin domain profile. 7 73 IPR000626 GO:0005515
Vifa6g03426 118 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
Vifa6g03426 118 Gene3D - 1 100 - -
Vifa6g03426 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Vifa6g03426 118 PIRSF MUB 1 118 IPR017000 -
Vifa6g03426 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 117 IPR040015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03426 Vifa-Chr6 1128552482 1128556297 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03426 - - gmx:100810070 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03426 6 1128552482 1128556297 Vifa6g03426 6 1128552482 1128556297 ECH