Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03401 ATGGCATTCTCATCTTCCTTGTGGTCTTCTCTCTTCATTCCAAATCCCAACAGAAATAACCGTTTCTCCACATTTTCTCCCGCCACTCCCAAACTCTCAACAACCACATTCGCCATCCCTCCCCTCTCAACCGCCACCGCCGCCGACGTCACCGGCGCTATCGACGGCACAACAATCGCCGTTGTAAGCGGCGGCTTCGTCGCCGGTCTCACCGCGCTACTCTCCCTAACAGACCCCGAGCGCCGGCGGCGCGAACAGGCGGAGGAAGTTGGCGGAGACGATAAGGAAGTTGTGAAGGAGTATTTTAATAATAATGGATTTCAACGGTGGAAGAAGATTTATGGAGATACTGATGATGTTAATAGAGTTCAGAGGGATATTAGGTTGGGGCATTCGAAGACGGTGGAGAATGCGCTGCAGATGCTGAAGGAGGAAGGTTCGCTTGAAGGTGTTACTATTTGTGATGCTGGATGTGGGACTGGTTCTCTGTCGATTCCGTTGGCTAAGGAAGGGGCTGTTGTGTGTGCTAGTGATATTTCTGCTGCTATGGTCGCTGAAGCCGAGAAACAGGCTAAAGAACAACTTGCGTCATCTGTGATGCCAAAGTTTGTGGTGAGTGACTTAGAGAGTTTGGATGGATTGTACGATACAGTGGTGTGCCTCGATGTTATGATTCATTACCCTCAGAGTAAAGCGGATGGGATGATTGCTCATCTTGCTTCTTTGGCAGAAAAGCGATTGGTTCTGAGCTTTGCACCTAAGACATTTTATTATGATGCACTGAAGAGGGTTGGAGAGTTGTTCCCTGGGCCTTCCAAGGCAACCAGGGCATATCTTCATTCTGAAGCAGATGTTGAAAGGGCATTGCGCAAGGTTGGGTGGACGATAAAGAAGAGAGGCTTAATTGCTACTCAATTTTACTTTGCCAAGCTTATCGAGGCTGTTCCTATGTAG 954 0.4885 MAFSSSLWSSLFIPNPNRNNRFSTFSPATPKLSTTTFAIPPLSTATAADVTGAIDGTTIAVVSGGFVAGLTALLSLTDPERRRREQAEEVGGDDKEVVKEYFNNNGFQRWKKIYGDTDDVNRVQRDIRLGHSKTVENALQMLKEEGSLEGVTICDAGCGTGSLSIPLAKEGAVVCASDISAAMVAEAEKQAKEQLASSVMPKFVVSDLESLDGLYDTVVCLDVMIHYPQSKADGMIAHLASLAEKRLVLSFAPKTFYYDALKRVGELFPGPSKATRAYLHSEADVERALRKVGWTIKKRGLIATQFYFAKLIEAVPM 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03401 317 NCBIfam magnesium protoporphyrin IX methyltransferase 94 313 IPR010251 GO:0015995|GO:0046406
Vifa6g03401 317 PANTHER METHYLTRANSFERASE 93 242 - -
Vifa6g03401 317 Gene3D Vaccinia Virus protein VP39 89 317 IPR029063 -
Vifa6g03401 317 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 88 299 IPR029063 -
Vifa6g03401 317 ProSiteProfiles Magnesium protoporphyrin IX methyltransferase (EC 2.1.1.11) family profile. 1 316 IPR010251 GO:0015995|GO:0046406
Vifa6g03401 317 CDD AdoMet_MTases 152 251 - -
Vifa6g03401 317 Pfam ubiE/COQ5 methyltransferase family 140 215 - -
Vifa6g03401 317 Pfam Magnesium-protoporphyrin IX methyltransferase C-terminus 220 315 IPR010940 GO:0015995|GO:0046406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03401 K03428 - gmx:100817017 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03401 6 1115834064 1115835887 Vifa6g03401 6 1115834064 1115835887 ECH