Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03385 ATGGCATCACGGGATGATGCTTCAACCAGTCAAAATGAAGAACCACCTGTGCAGAATGAAAGAAGGTCGATAAGAACAAGAACAGAGTCGACAAGGCTAACTGGATATGAAAGTATTCCAGCTTCCTTCCTCTTTGACTGGTACAACGGTTCATTCTATCAAATACCATTCAACTCTGCTCTAAATAGGAGGTGTGCACCTTCTTCCTTTAGACCCTTGAGCTTGAAGTGTTTGTGTGCAAAAATGAACAATGGTGATGTGAAAATGACAAAGACAGAGACTATTCTTCATGATCTTTATGAGAAACAAAGACAGACTCCTTACTATGATAATCTCTGTCGACCCGTCTCAGATTTGGTTCCGTTCATTGCATCTGGAATCAGAGGTGTTACTACCAACCCCGCGATATTTGAAAAAGCTATATCATCATCAAATGCTTACAATCAACAGCTGAGGGATTTGGTAGATGCAGGCAAAGACATAGAAAGTGCCTACTGGGAATTGGTTGTGAAAGACATACATGATACTTGCAAACTCTTGGAACCAATTTACATTGAATCAGAGGGAGTAGATGGCTATGTATCTGTTGCAGTTTCTCCCATGCTTGCAAATGATACCAAAGGGACAATTGAAGCAGCAAAATGGCTTCATAAAACGGTTGCATGTCCAAATGTTTATATTAAAATTCCTGCAATTGATGAATCTATTCCTTCAATAAAGGAAGTTATTTCTCTTGGGATAAGTGTTAATGTCACTCTCATATTCTCTCTCCCTAGATATGAAGAAGTTATTAATGCTTACTTGGATGGTCTTGAGGCTTCTAGTATGAATGATCTGTCTAAGGTTTCAAGTGCAGCAGCTTTCTACATCAGTAGAGTGGATGTTGCAATTGACAAGAAACTTGAGCAGATTGGCACTGCTGAGGCTCTTGATCTCACAGGAAAGGCCGCAGTTGCTCAAGCAGTGTTAGCTTATCAGCTTTACCAGAAAATGTTTTCGGGTCCAAGATGGGAGCTCTTGGAGAAGAGAGGTGCCAAGAAGCAAAGATTGATGTGGGCATCAACCAATGTGAAAAATCCATCTTACCCAGATACTTTTTATGTTAATTCCCTTATTGGACCAGATACGATTTCAACCATACCACCAGACCCTGCTCTAAAAGCATTCATGGACCATGGTATTCTTTCAAGAACCATTGATGCAAATGTATCAGAGGCCGAAAGCATTTACAATGCAATCGAGAGATTGGGGATTGATTGGAGTCGTGTTGGATCACAACTTGAAAACGAGGTGCTGGATTCTTTCAAAAGAAGCTTTGAAAATGTGATTGAATGCTTGGGAAAGAAAGCTAGAATGTAA 1359 0.4018 MASRDDASTSQNEEPPVQNERRSIRTRTESTRLTGYESIPASFLFDWYNGSFYQIPFNSALNRRCAPSSFRPLSLKCLCAKMNNGDVKMTKTETILHDLYEKQRQTPYYDNLCRPVSDLVPFIASGIRGVTTNPAIFEKAISSSNAYNQQLRDLVDAGKDIESAYWELVVKDIHDTCKLLEPIYIESEGVDGYVSVAVSPMLANDTKGTIEAAKWLHKTVACPNVYIKIPAIDESIPSIKEVISLGISVNVTLIFSLPRYEEVINAYLDGLEASSMNDLSKVSSAAAFYISRVDVAIDKKLEQIGTAEALDLTGKAAVAQAVLAYQLYQKMFSGPRWELLEKRGAKKQRLMWASTNVKNPSYPDTFYVNSLIGPDTISTIPPDPALKAFMDHGILSRTIDANVSEAESIYNAIERLGIDWSRVGSQLENEVLDSFKRSFENVIECLGKKARM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03385 452 ProSitePatterns Transaldolase signature 1. 129 137 IPR018225 GO:0005975
Vifa6g03385 452 SUPERFAMILY Aldolase 103 448 - -
Vifa6g03385 452 MobiDBLite consensus disorder prediction 1 17 - -
Vifa6g03385 452 Hamap Transaldolase [tal]. 96 452 IPR004732 GO:0004801|GO:0005737|GO:0006098
Vifa6g03385 452 Pfam Transaldolase/Fructose-6-phosphate aldolase 123 443 IPR001585 GO:0005975
Vifa6g03385 452 MobiDBLite consensus disorder prediction 1 29 - -
Vifa6g03385 452 CDD Transaldolase_like 107 440 IPR004732 GO:0004801|GO:0005737|GO:0006098
Vifa6g03385 452 NCBIfam transaldolase 126 443 IPR004732 GO:0004801|GO:0005737|GO:0006098
Vifa6g03385 452 Gene3D Aldolase class I 94 450 IPR013785 -
Vifa6g03385 452 PANTHER TRANSALDOLASE 106 449 IPR001585 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03385 Vifa-Chr6 1110570186 1110591348 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03385 K00616 - gmx:100811673 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03385 6 1110570186 1110591348 Vifa6g03385 6 1110570186 1110591348 ECH