Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03226 ATGAAACCAATATTGGCTCAGTTATGCATTTCTCCCAACATACGCAAAGCCAACAAGAAAGTCAACAACTTTTCATCAGATGAAACATGTCTCAATAACATTCACTCAGATTCTCTTTCAAGCTTTTTCGAGCTTGGTCTTCCATGTAACGAGCCTCTGGAAGAAAAACTCTCTTGGATTCAATCACAAATCATAGGTAATGATACAGAGTTTGATTCTCCATTTGGAAGAAGGAGACTTGTATATGCAGATCATACAGCTTCTGGCCGAAGTCTTCATTGCATTGAAAACTTCATCACCAAACATGTTCTTCCTTTCTACGGTAATACTCATACTAGCGAGAGTCAGGTTGGACGCAGTACAACAAAAATGCTACATGAAGCAACGGAGTATATTAAGAAATGTTTAGGAGGTGGAGAAGACGAAGCACTCGTGTTATGCGGTTCGGGTGCAACCGCGGCGATCAAGAGGCTACAAGAAGTAATGGGAATTGGTGTACCTTCAATTTTGAGGGAGAGGATGTTGAGGTGCCTTGATGAACAAGAAAGATGGGTGGTTTTTGTAGGACCTTATGAGCATCATTCAAATTTACTTTCTTGGAGGCAGAGTTTGGCTGAGGTTGTAGAGATTGGACTTGATGATAAAGGGTTGCTTGACATGGAAGCTTTAAAGATGCAACTTGAGGTTTATAAAGATTCTAATAGACCTTTGTTGGGATCTTTCTCTGCTTGTAGTAATGTTACCGGAATTTACTCCGATACGCGCGCAATTGCTAGGCTTCTTCATCAATACAATGGATTTGCATGTTTTGATTTTGCAGCAAGTGGTCCTTATGTGGAGATTGAGATGAGATCAGGGAAGATTGATGGGTATGATGCTGTGTTCATCAGTCCACATAAATTTCTTGGTGGTCCTGACTCTCCTGGAGTGCTTTTAATGAACAAGGCTTTGTATAAGTTGAGATATGCACCTCCCTCTACATGTGGAGGTGGAACTGTCAATTACGTCAATGGATTCAATGAAAAGGATACATTATACTTGGAGGATATAGAGGAAAGAGAAAACGGAGGCACACCAGCAATAATCCAAACAGTGAGAGCAGCATTAGCATTTTGTGTGAAAGAATACATCAACTACAAAGAGATTGAAAAACTTGAACACTTGTACATTAACAAAGCACTCAAGAGACTCATGTCAAACCAAAACATTCACATTCTAGGAAACTTGAACACCAAAAGACAAGCCATATTGTCATTTGTCATTTACTCTACAACAAATACTAAGAACAAAAGAGGTAAGATACTTAGTGGCTCTTTCGTCGCAACATTGTTAAACGATCTCTTCGGAATTCAATCTCGAGGAGGCTGTGCTTGTGCTGGTCCTTATGGCCATGATTTGCTCAACATCAATCAATCTCAATCGCTGGCGGTTAGGTCGACAATTCAAGAGGGTTATGTTGGTGTGAAACCGGGTTGGACAAGAGTTAGTTTTCCTTATTACATGAAGGAAGAGGATTTTGAGTTCATTTTGACTGCCATAGAGTTTCTATCTATCTATGGCCAAAGGTTTCTTACACTATACAAGTTTGATTTGAAGAATGGAAGTTGGACAATAAAGAAACATAAACTTGAGACTCTAATCAAGGAAAGTAAATGTTGTTGTAAAGAAGCTAAAGAGAAAACAATGAGTGATTATGTGAAAGTTGGTAGTGAGTATAATGTTGGAAGTAAGCAAATTGGAGAGTTGAGAAGGAAATCATACATAGCTGCTAAATGTATTGCTAGGCGACTCCCTAAATTTCCTTCTCAAAGCATGGTTCATCTTGATGTAGATGTAGATCCTAATGTCCTCCATTTTATAGTTTAG 1866 0.3901 MKPILAQLCISPNIRKANKKVNNFSSDETCLNNIHSDSLSSFFELGLPCNEPLEEKLSWIQSQIIGNDTEFDSPFGRRRLVYADHTASGRSLHCIENFITKHVLPFYGNTHTSESQVGRSTTKMLHEATEYIKKCLGGGEDEALVLCGSGATAAIKRLQEVMGIGVPSILRERMLRCLDEQERWVVFVGPYEHHSNLLSWRQSLAEVVEIGLDDKGLLDMEALKMQLEVYKDSNRPLLGSFSACSNVTGIYSDTRAIARLLHQYNGFACFDFAASGPYVEIEMRSGKIDGYDAVFISPHKFLGGPDSPGVLLMNKALYKLRYAPPSTCGGGTVNYVNGFNEKDTLYLEDIEERENGGTPAIIQTVRAALAFCVKEYINYKEIEKLEHLYINKALKRLMSNQNIHILGNLNTKRQAILSFVIYSTTNTKNKRGKILSGSFVATLLNDLFGIQSRGGCACAGPYGHDLLNINQSQSLAVRSTIQEGYVGVKPGWTRVSFPYYMKEEDFEFILTAIEFLSIYGQRFLTLYKFDLKNGSWTIKKHKLETLIKESKCCCKEAKEKTMSDYVKVGSEYNVGSKQIGELRRKSYIAAKCIARRLPKFPSQSMVHLDVDVDPNVLHFIV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03226 621 Pfam Aminotransferase class-V 81 506 IPR000192 -
Vifa6g03226 621 Gene3D - 96 330 IPR015421 GO:0003824
Vifa6g03226 621 Gene3D Aspartate Aminotransferase, domain 1 353 520 IPR015422 GO:0003824
Vifa6g03226 621 PANTHER CYSTEINE DESULFURASE 52 522 - -
Vifa6g03226 621 SUPERFAMILY PLP-dependent transferases 74 514 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03226 Vifa-Chr6 1068648037 1068652121 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03226 - - gmx:100776921 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03226 6 1068648037 1068652121 Vifa6g03226 6 1068648037 1068652121 ECH