Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03220 ATGGAGCTAGAATCATATCCATTGTTAGCAAAAATCATATCCATGTTACCTCAAAATGGAGACTCTGAACCTTTATCTAAAACAAGTAACGTATCAGAAGTATCTAATGATTTTTGCTACCACCCTGAGTCATTTAAGAAGCTGGTGGAAATGGACTTGCCTTGTCATGAATCTGTGGAAGAAAAACTGCGTTGGTTGCGGTCTCAAATCATAGGTGATGATGATGCTGAGTTTGATTCTTCGTTTGGCAGAAGGAAACTTGTCTATGCGGATCATACTGCTTCTGGCCGCAGCCTTCGTTACAGTGAAAATTTCATCATCAATCATCTTCTTCCTTTCTATGGTAATACTCATACTTGCGACAGTTATGTGGGAAGCCGGACAACAAAAATGCTACACGAAGCAACGGAGTACATTAAGAAATGCTTAGGTGGTGGAGAAGGTGATGCAATCATCTTTTGTGGTTCAGGAACAACTTCAGCAATCAAGAGGCTACAAGAAGTAATGGGAATTGCGGTGTCTTCTATTTTGAGGGAGAGGATGTTGAGGTGCCTTGATGAACAAGAAAGATGGGTGGTTTTTGTTGGCCCACATGAGCATCATTCAAATTTACTTTCTTGGAGGCAGAGTTTGGCTGAGGTTGTAGAGGTTGGATTTGATGATAAAGGGTTGCTTGACATGGAAGCTTTAAAGATGCAACTTGAAGCTTATAAAGATTCAAGTAGGCCTTTGTTGGGATCTTTCTCTGCTTGCAGTAATGTTACTGGAATTTTCTCGGATACGCGTGCAATTGCTAGGCTTCTTCATCAATATAATGGATTTGTATGTTTTGATTTTGCAGCAAGTGGTCCTTATGTGGAAATTGACATGAGATCAGGGGAGGCTGATGGGTATGATGCTGTGTTCATCAGTCCACATAAGTTTCTTGGTGGTCCTGACTCTCCCGGAGTGCTTTTGATGAACAAGGCTTTGTATAAGTTGAGATCTGCACCTCCATCCACTTGTGGAGGTGGAACTGTCACTTATGTTAATGGCTTCAATGAAAAGGACACATTATACATGGAGAACATAGAAGAGAGGGAAAATGGGGGCACACCGCCGATTATCCAGACAGTGAGAGCAGCATTGGCATTTTGGTTGAAAGAATACATTGGCTACAAAGAGATTGAAAAAAGAGAAGAACTATACATTAACAAGGCACTTAAGAGACTTGAATCCAACTCCAACATTAAGATTTTGGGTAACTTGCACGTCAAGCGACAAGCTATACTGTCATTTCTCATCTATTCCACCACCAATTCTAACTTATCAACTGATAGCAGTTGCCAAGAACAAGAAAAGGAACTTAATCTATGGCAAGAAATGGGGAACCAAAGAGGTAAACCACTCCATGGCCCTTTTGTTGCAGCAATGCTTAATGACCTTTTTGGTATTCAAGCTCGAGGTGGGTGTGCTTGTGCTGGACCTTATGGACATGAATTACTCAACATCGATAAATCTCAATCACTTGCTATTCGATCAGCCGTTCAACAGGGCTATATTGGAGTGAAACCTGGTTGGACAAGAGTTAGTTTTCCTTATTACATGAGTGAAGAGGATTTTGAGTACATTCTAAGTGCTATAGAGTTTTTAGCTTTATATGGCCAAAGGTTCTTTCCTCTATACACCTTCAATTTGAGGAATGGAAGTTGGAGAATGAAAATAGAAAGTTTTGAGGCATTAAACAAGGAAGAGAATTGCAACATTTCTAATCATTTATTGGGAAACAAAGTAGAGAAAGTAAACACAAGTGGTGGAGTTAAACAAGAAGGTGTGGTTGTGAGAAGGAGTCAATCTTATTTTGATATGGCCAAATATATTGCAAATAGTCTCCCTAAATTTCCTCCTCAGGGTATATTGCATGAAGACATTGATTCTGATACCCTCTACTTCAGAGTTTGA 1941 0.3998 MELESYPLLAKIISMLPQNGDSEPLSKTSNVSEVSNDFCYHPESFKKLVEMDLPCHESVEEKLRWLRSQIIGDDDAEFDSSFGRRKLVYADHTASGRSLRYSENFIINHLLPFYGNTHTCDSYVGSRTTKMLHEATEYIKKCLGGGEGDAIIFCGSGTTSAIKRLQEVMGIAVSSILRERMLRCLDEQERWVVFVGPHEHHSNLLSWRQSLAEVVEVGFDDKGLLDMEALKMQLEAYKDSSRPLLGSFSACSNVTGIFSDTRAIARLLHQYNGFVCFDFAASGPYVEIDMRSGEADGYDAVFISPHKFLGGPDSPGVLLMNKALYKLRSAPPSTCGGGTVTYVNGFNEKDTLYMENIEERENGGTPPIIQTVRAALAFWLKEYIGYKEIEKREELYINKALKRLESNSNIKILGNLHVKRQAILSFLIYSTTNSNLSTDSSCQEQEKELNLWQEMGNQRGKPLHGPFVAAMLNDLFGIQARGGCACAGPYGHELLNIDKSQSLAIRSAVQQGYIGVKPGWTRVSFPYYMSEEDFEYILSAIEFLALYGQRFFPLYTFNLRNGSWRMKIESFEALNKEENCNISNHLLGNKVEKVNTSGGVKQEGVVVRRSQSYFDMAKYIANSLPKFPPQGILHEDIDSDTLYFRV 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03220 646 Gene3D Aspartate Aminotransferase, domain 1 356 547 IPR015422 GO:0003824
Vifa6g03220 646 SUPERFAMILY PLP-dependent transferases 81 542 IPR015424 -
Vifa6g03220 646 Gene3D - 106 343 IPR015421 GO:0003824
Vifa6g03220 646 PANTHER CYSTEINE DESULFURASE 55 550 - -
Vifa6g03220 646 Pfam Aminotransferase class-V 109 431 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03220 Vifa-Chr6 1066889684 1066892054 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03220 - - lja:Lj4g3v2742940.1 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03220 6 1066889684 1066892054 Vifa6g03220 6 1066889684 1066892054 ECH