Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03208 ATGGCAGTTTCCACTCCTCTATTCTCCTTATCTTCAATTTCATCTCTTTACCCTTCAAAGCTTCATTCCCTTTCTCGCACTTCGACACTCGCTAGTAACCCATCTCCCCACACCAACCTCGCTATTCGCTCTTCTTATTCCGGAAACGGTTCTTCCCCTGATGCCTTCAATTCCAGGAACTCTGAAATTCCCTTTGCACTGTCAATGGGTGAATCTAACAAGCCCAGGTGGCGAAGGGTTTTGCTCAAAGTTAGTGGAGAAGCACTTGCAGGAGATCAGGCTCAGAATATTGACCCTAAGATAACTATGGCTATTGCAAGGGAAGTGGCAGCTGTAACCCGCCTTGGGATTGAGGTCGCACTAGTAGTTGGTGGAGGTAACATCTTCCGCGGTGCCTCCTGGGCTGGAAGTAGTGGTCTTGACCGCTCATCTGCTGATTATATTGGGATGTTGGCTACTGTTATGAATGCTATATTTCTTCAAGCAACAATGGAGAGTATTGGCATTCCAACTAGGGTGCAGACTGCATTTCGCATGTCTGAGGTGGCAGAACCATACATACGCAGAAGGGCCATCAGGCATTTGGAAAAAGGAAGGGTTGTCATTTTTGCTGCTGGAACTGGAAATCCATTCTTTACCACAGACACTGCCGCATCACTTAGATGTGCAGAAATTAATGCAGAGGTTGTACTCAAAGCTACAAATGTTGATGGAGTATTTGATGACGACCCAAAGCGTAACCCTCAAGCGCGTCTTCTCGACACAGTGACCTATCAGGATGTAATAACAAAAGATCTGTCAGTGATGGACCTTACGGCGGTAACATTATGTCAGGAAAATAATATTCCTGTCGTTGTCTTCAATCTAAACAAACCAGGTAACATAGAGAAAGCCATTAAAGGGGAGAGAGTTGGAACTTTGATTGGTGCAACGTGGAATTCTACCGTATCAAGAACGTGA 960 0.4542 MAVSTPLFSLSSISSLYPSKLHSLSRTSTLASNPSPHTNLAIRSSYSGNGSSPDAFNSRNSEIPFALSMGESNKPRWRRVLLKVSGEALAGDQAQNIDPKITMAIAREVAAVTRLGIEVALVVGGGNIFRGASWAGSSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAASLRCAEINAEVVLKATNVDGVFDDDPKRNPQARLLDTVTYQDVITKDLSVMDLTAVTLCQENNIPVVVFNLNKPGNIEKAIKGERVGTLIGATWNSTVSRT 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03208 319 PANTHER URIDYLATE KINASE 70 313 - -
Vifa6g03208 319 SUPERFAMILY Carbamate kinase-like 75 308 IPR036393 -
Vifa6g03208 319 CDD AAK_UMPK-PyrH-Ec 78 309 IPR015963 GO:0005737|GO:0006221|GO:0033862
Vifa6g03208 319 Hamap Uridylate kinase [pyrH]. 75 309 IPR015963 GO:0005737|GO:0006221|GO:0033862
Vifa6g03208 319 Pfam Amino acid kinase family 79 288 IPR001048 -
Vifa6g03208 319 NCBIfam UMP kinase 78 308 IPR015963 GO:0005737|GO:0006221|GO:0033862
Vifa6g03208 319 FunFam Uridylate kinase 71 311 - -
Vifa6g03208 319 Gene3D - 68 316 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03208 Vifa-Chr6 1058617706 1058620713 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03208 K09903 - gmx:100781745 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03208 6 1058617706 1058620713 Vifa6g03208 6 1058617706 1058620713 ECH