Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02984 ATGTGGTGGATGATGGGGGAATCTGGAGGGAATTACTGTTCTAAGAAGAGTGATGATTTGTGTAGCAATGTTTGTGGTCAGGAATCAAGTCAAGCTTCGAGTATGTCAAGAATTCGTTGCGTTTTGCGGGGTTTGGATGTGAAAACCTATATATTCCTGTTTGCTTTTGTTCCAATGTGCATCTTTGGAATATATATACATGGACAGAAGATCTCTTACTTTCTGCGGCCACTGTGGGAGAAACCACCCAAGTCTTTCAATGTTATTCCTCATTACTATAATGACAATGTTACCATGGAGAATCTCTGTAGGCTTCATGGATGGGGAGTTCGTGAGTACCCAAGGCGCGTTTATGATGCGGTGTTGTTTAGTAATGAGATTGAAATACTTACTTTGCGTTGGAAAGAACTGTACCCGTACATAGCTGAATTTGTGCTCCTTGAGTCGAATTCTACATTTACTGGATTGCCTAAGCCTCTGGTGTTCAACAGCAATAGGGAGCAGTTCAAATTTGTTGAGCCCCGGTTAACTTATGGGACTATTGGTGGGAGATTTAAGAAAGGAGAAAACCCATTTGTCGAGGAGGCATATCAACGTGTGGCATTGGATCAGCTCCTTAAGATTGCTGGTATTACAGATGATGACTTATTGATTATGTCTGATGTGGACGAGATACCAAGTGCTCACACTATTAACCTCTTGAGATGGTGCGATGAAGTACCTTCAGTCTTGCATCTACAGCTGAAGAATTATCTGTATTCTTTTGAGTTTCTTCTGGATGATAAGAGCTGGAGGGCTTCGATTCACAGGTATCAATCTGGCAAGACAAGATATGCTCACTACCGCCAGTCCGACAACATGCTGGCAGATGCTGGGTGGCATTGCAGCTTTTGCTTCCGTCGAATCAGCGATTTCATTTTTAAGATGAAAGCTTACAGCCACTATGACAGAGTTAGATTCTCTCACTATTTAAATCCCGGCAGAATTCAGAAAGTAATATGTGAAGGGGCTGATCTATTCGATATGCTACCCGAGGAGTACACCTTCAAGGAAATTATTGGTAAAATGGGTCCAATACCCCATTCATATTCTGCGGTTCACCTTCCTGCTTTCCTTCTGGAAAATGCAGAGAAGTACAAATTTCTCTTGCCAGGGAATTGCATGAGAGAGAGATGA 1176 0.4226 MWWMMGESGGNYCSKKSDDLCSNVCGQESSQASSMSRIRCVLRGLDVKTYIFLFAFVPMCIFGIYIHGQKISYFLRPLWEKPPKSFNVIPHYYNDNVTMENLCRLHGWGVREYPRRVYDAVLFSNEIEILTLRWKELYPYIAEFVLLESNSTFTGLPKPLVFNSNREQFKFVEPRLTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSAHTINLLRWCDEVPSVLHLQLKNYLYSFEFLLDDKSWRASIHRYQSGKTRYAHYRQSDNMLADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPGRIQKVICEGADLFDMLPEEYTFKEIIGKMGPIPHSYSAVHLPAFLLENAEKYKFLLPGNCMRER 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02984 391 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 34 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Vifa6g02984 391 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02984 Vifa-Chr6 986161185 986163014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02984 1 390 Glycosyltransferase AT1G12990 78.205 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02984 K00737 - gmx:100787062 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g02984 6 986161185 986163014 Vifa6g02984 6 986161185 986163014 ECH