Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02699 ATGATGAACTACTCATATCAATGTCTTCCCAAAACCCATTTTCTCAAAGTTTCCACCTTTCACCCTTTCTTCAAATTCAACCCATTCCCATACACTAACTATGCTGCAAACACTACTCATACTCATAAAACTCCCTCATTCACCATCAACTGCAACCTCAAAAACGTGGGCAAGAAGGACTTATTGTCCCAGAAGATTGTCTTATCAGAAGCTTCTCCTCCACCACTCACACAGGATAATGATGTTCCTTCAACCTCAAAGGAAAACAAAGCTTCCAATGGTCTGTTTAAGAAGTTGAGCAAAAGGGTGTTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGGGAAATGTTCACCATTGCTTTTTTAATGGGGTTGGGCACTTTTATTGATCAAGGTGAGGCCCCTGAGTTTTATTTCCAGAACTACCCTGAAGATCATCCAGTGTTAGGATTTTTTACTTGGAGATGGATTTTCTTCCTTGGTTTTGATCACATGTATTCCGCCCCTATATTTCTTGGAATGTTGGCTCTTCTCGGTGCTTCCCTTATGGCATGCACTTACACAACACAGCTCCCGCTCATCAAGGTTTCTAAAAGATGGTCCTTTATGCACTCTGCCGAGGTTATACGCAAGCAAGAGTTTTCAGAATCGTTGCCTAGAGCATCAATCCAAGATGTTGGTACTATATTAATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCAACTTTGTATGCATTCCGCGGACTTGCCGGTCGGCTAGCCCCAGTTGGAGTTCATATAGCACTTTTGTTGATCATGGCTGGAGGAACTTTAAGTGCTGCAGGGAGCTTTAAAGAGATTCATGTCAACAAATTCTCTATGGATTATTATGAAAGTGGAGAGGTTTCACAGTTCCGCACCGATCTTTCCCTGTTGAACATGGATGGGAAAGAAGTAATGAGGAAAACAATTAGTGTAAATGATCCTTTACGTTACGAGGGTATCACCATATACCAAACGGATTGGAGTATTTCAACCCTACAAGTTCTCAAGGACAATGAAGGACCTTTTAATTTGGCTATGGCACCTCTTAAGATCAATGGAGATAAGAAACTTTATGGTACTTTTCTACCTGTTGGAGATGTTAACTCTCCTAATGTCAAGGGAATATCTATGCTTGCTCGTGACCTGCAATCAATTGTCCTTTATGATAAGGAAGGGAAATTTGCCGGAGTTAGACGACCTAACTCAAAGCTCCCAATCAACATTGATGGCTCAGAAATTGTCATTGTTGATGCAATAGGGAGTAGTGGCTTGGACTTGAAGACTGACCCTGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTGATGCTCACAACTTGCATCAGCTACTTATCTCACTCACAGATATGGGCCTTACAAGATGGGACAACAGTCGTTATTGGAGGGAAGACAAATAGAGCAAACTTTTTGAGACATGAGGGGCCAAATACCAACGCTCTTAAAGTATATCTCATTGATGAATTCTACAAGTTGAAGTGTAACAGATCCTGTAATTCAAGTCTCCTTCCTGTTATTCATACATTTAACAATGTATTTAAGTAG 1593 0.4112 MMNYSYQCLPKTHFLKVSTFHPFFKFNPFPYTNYAANTTHTHKTPSFTINCNLKNVGKKDLLSQKIVLSEASPPPLTQDNDVPSTSKENKASNGLFKKLSKRVLQILSNLPLAIGEMFTIAFLMGLGTFIDQGEAPEFYFQNYPEDHPVLGFFTWRWIFFLGFDHMYSAPIFLGMLALLGASLMACTYTTQLPLIKVSKRWSFMHSAEVIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPTLYAFRGLAGRLAPVGVHIALLLIMAGGTLSAAGSFKEIHVNKFSMDYYESGEVSQFRTDLSLLNMDGKEVMRKTISVNDPLRYEGITIYQTDWSISTLQVLKDNEGPFNLAMAPLKINGDKKLYGTFLPVGDVNSPNVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQDGTTVVIGGKTNRANFLRHEGPNTNALKVYLIDEFYKLKCNRSCNSSLLPVIHTFNNVFK 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02699 530 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 281 486 IPR023494 -
Vifa6g02699 530 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 100 497 IPR023494 -
Vifa6g02699 530 MobiDBLite consensus disorder prediction 71 90 - -
Vifa6g02699 530 Pfam ResB-like family 282 343 IPR007816 -
Vifa6g02699 530 Pfam ResB-like family 112 280 IPR007816 -
Vifa6g02699 530 Pfam ResB-like family 379 485 IPR007816 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02699 13 484 Miscellaneous Gene Families AT1G49380 63.391 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02699 K07399 - gmx:100807003 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g02699 6 921456451 921460191 Vifa6g02699 6 921456451 921460191 ECH