Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02297 ATGTCTATAACCCAAAACCTCACCCTCTCAATCTCGTCTTCTTCCTCTGCTTTCTTAGCTCCTTCCAATTTCAATTCAAGGAGTCAGGTATCTTTGCAAGCTAAGAGCCCCAGCATTTGTAAATGCATCGCTACACCCCAAGAAGTTGAGACTGCCTACAAGACAAGGGTCTCTCGCAATGAAAACTTGGGTAAACTTCAAGCTGGTTATCTCTTTCCTGAGATTGGTAGAAGAAAGTCTGCACACTTACTGAAGTACCCTGATGCAAAAATAATAAGCCTTGGGATTGGTGATACTACTGAACCCATTCCTGAAGTCATAAGTTCTGCATTGGCAAAGAAATCACTTGCATTGTCAACCTTGGAAGGATATAGTGGTTATGGAGCTGAACAGGGTGAAAAGCCACTAAGAAGTGCAATTGCTTCAACATTTTACCCTGATCTTGGCATAGAAGATGATGATATATTTGTTTCAGATGGAGCAAAGTGTGATATATCTCGTCTCCAGATTGTCTTTGGTTCAAATGTGAAAATGGCCGTGCAGGACCCATCATACCCGGCCTATGTAGACTCAAGTGTAATTATGGGCCAGACTGGTTTGTACCAGAAGGATGTTCAGAAGTTTGCGAACATTGAATATATGAAGTGTAGTCCAGAAAATGCAACAAGGGAACAACTGGTCCAACTAGTTCGGTATGCTAAGGACAATGGATCTATAATAATACACGATTCAGCATATGCTATGTATATGTCTGGTGACAACCCGCGCTCCATCTTTGAAATTCCTGGAGCCAAAGAGGTTGCCATTGAAACTTCATCATTTAGCAAGTATGCTGGGTTCACCGGAGTCCGATTGGGTTGGTCTGTGGTTCCAAAAGAATTACTGTTTTCTGATGGATTTCCTGTTGCCAAGGACTTCAACCGTATCGTATCTACTTGTTTCAATGGTGCATCAAATATTTCTCAGGCTGGTGGTCTTGCATGCCTTTCACCAGAAGGCCTTAAGGCTATGCGCGGGGTAATTGGATACTACAAAGAAAATACCAACATAATAATGGAGACATTTGATTCTCTTGGGTTTAAAGTGTATGGAGGGAAAAATGCACCGTATGTGTGGGTCCACTTCCCAGGCCAAAGTTCATGGGATGTGTTCAGTGAGATTCTTGAGAAGACGCATGTAGTTACAACTCCTGGGAGTGGTTTTGGACCTGGTGGTGAAGGTTTTGTCAGGGTCAGTGCTTTTGGTCACAGGGAAAATGTCTTGGAGGCCTGCAGAAGATTCAAGGAGCTATACAAGTGA 1299 0.4296 MSITQNLTLSISSSSSAFLAPSNFNSRSQVSLQAKSPSICKCIATPQEVETAYKTRVSRNENLGKLQAGYLFPEIGRRKSAHLLKYPDAKIISLGIGDTTEPIPEVISSALAKKSLALSTLEGYSGYGAEQGEKPLRSAIASTFYPDLGIEDDDIFVSDGAKCDISRLQIVFGSNVKMAVQDPSYPAYVDSSVIMGQTGLYQKDVQKFANIEYMKCSPENATREQLVQLVRYAKDNGSIIIHDSAYAMYMSGDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWSVVPKELLFSDGFPVAKDFNRIVSTCFNGASNISQAGGLACLSPEGLKAMRGVIGYYKENTNIIMETFDSLGFKVYGGKNAPYVWVHFPGQSSWDVFSEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENVLEACRRFKELYK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02297 432 CDD AAT_like 92 429 - -
Vifa6g02297 432 Gene3D Aspartate Aminotransferase, domain 1 85 426 IPR015422 GO:0003824
Vifa6g02297 432 Pfam Aminotransferase class I and II 221 427 IPR004839 GO:0009058|GO:0030170
Vifa6g02297 432 Gene3D - 100 329 IPR015421 GO:0003824
Vifa6g02297 432 PANTHER AMINOTRANSFERASE 221 432 IPR019942 GO:0008483
Vifa6g02297 432 FunFam LL-diaminopimelate aminotransferase, chloroplastic 316 428 - -
Vifa6g02297 432 SUPERFAMILY PLP-dependent transferases 70 427 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02297 Vifa-Chr6 802928231 802931828 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02297 K10206 - gmx:100801405 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g02297 6 802928231 802931828 Vifa6g02297 6 802928231 802931828 ECH