Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01933 ATGGACCGTTGCGGAGAAGGAGATGCTGTAATTGAAAGGCTTGGAGTTGCTTTGGAAGACAACAAGGAAAAGGAAGCCAGGGATGTGAAGTTGATAATGGCTCAGATTCTGTTTCTGCAAAAGAATGTTGATGAAGCTTTGAGTATGTATGAGGTATTAATCAAAGAAGATGCTAATGATTTTAGACCTTATTTTTGCAGGGGAGTGATTTATACATTGCTTGATAAGAATTATGAAGCTAAGGAGGAATTTGCAAAGTATAGGGATTTGTCACCTAAGAAGTTTGAGGTTGATGGTTACTTGAGAACACCTTTGTCAAGGATCAAAGATTTTGGTACTGATCAAAGCTAG 351 0.3789 MDRCGEGDAVIERLGVALEDNKEKEARDVKLIMAQILFLQKNVDEALSMYEVLIKEDANDFRPYFCRGVIYTLLDKNYEAKEEFAKYRDLSPKKFEVDGYLRTPLSRIKDFGTDQS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01933 116 PANTHER TRANSMEMBRANE PROTEIN 4 95 - -
Vifa6g01933 116 SUPERFAMILY TPR-like 27 109 IPR011990 GO:0005515
Vifa6g01933 116 Gene3D Tetratricopeptide repeat domain 9 109 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01933 Vifa-Chr6 718908212 718908562 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01933 - - psat:127100967 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01933 6 718908212 718908562 Vifa6g01933 6 718908212 718908562 ECH