Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01766 ATGGAATCAATCCTAGCAAGAGCTCTCGAGTATACTCTCAAATACTGGCTCAAATCTTTCACCCGAGATCAGTTCAAGTTGCAGGGTCACACCGTTCAACTATCTAATTTAGATATAAACGGTGATGCATTGCATTCCAGCGTTGGATTGCCGCCAGCACTCAATGTGGCTACAGCCAAAGTTGGCAAATTGGAGATCACGATTCCGTCCGTGAGCAATAATTCTGATTTTAAACCATCTGAGTCTCCAACCAGTTCCACGCCTACAGCAGCCTCTGCCAAGGGTAGTGGGTATGGTTTCGCTGATAAGATTGCAGATGGAATGACAATACAGATTCATACAGTTAATCTGTTACTTGAAACTCATGGAAGTGCTTGTCTCGAAGGGGCGGCAACATGGGCACCACCCATGGCGTCTATAACCATACACAACCTTTTGCTGTGTACCACAAATGAAAGCTGGCAGGTTGTAAATCTTAAGGAGGCCCGGGATTTCTCATCTAATAAGAAGTATATTTATGTCTTCAAAAAATTGGAATGGGAATCATTATCTATTGATCTTTTGCCTCATCCAGACATGTTCACGGATGCTACTTTAGGCAGTTCTCAAGTAGGTTCAAACCTAAGAGATGATGATGGTGCAAAGAGAGTATTCTTTGGAGGCGAGCGTTTTATAGAAGGAATATCAGGAGAAGCATACATCACCGTTCAGAGAACTGAATTGAACAGTCCACTTGGGCTCGAGGTTCAGTTGCATGTCACAGAAGTCGTTTGCCCTGCATTAAGTGAACCAGGACTACGCGCACTTCTCCGCTTTATGACAGGAATATATGTTTGTCTAAACAGGGGAAATGTAGATTTCAAGGCCCAGCAGCAATCTACTGAAGCTGCTGGGCGTTCTCGTGTGTCAATTGTTGTGGATCATATATTTCTCCGCATTAAAGATTCTGGGTTCCAGCTTGAGCTACTAATGCAGTCCCTCTTTTTTTCTCGGGCCAGTCTTTCTGAAGGAGATAATGACAGTAACTTGACCAGGATTACAATTGCGGGACTATTTTTGAGGGATACATTTTCATGCCCTCCATGCACATTAGTGCAACCATCGATGCAATCTGTCACAGAAGATGCTTTCCAAGTGCCCGAGTTTGCTAGAAGCTTTTGCCCTCCAATATATCCTCTCGAAGAACAGCAGTGGCAATTGATTGTGGGAACTCCTCTAATATGCATTCACACTCTTCAGATCAAGCCTTCTCCACTTCCACCGTCTCTTGCTTCTCAAACAGTTATTGATTGTCAGCCTCTTATGGTCCACCTCCACGAAGAATCCTGCTTGAGGATATCATCCTTCTTAGCTGATGGAATTGTTGTCAATCGTGGTGACATTTTACCAGATTTCTCTGTGAATTCTTTTATTTTCACTCTCAAGGGATTGGATACTACAGTTCCTTTGGATAAAGCCCAATTAGATTTTTGTGTAAGCAATACAGATGATACCGATGAATTCTTATTTATTGGAGCAAGGCTACATATTGAAAACCTTTTCGTTTTAGATTCACCCTTAATGAAACTGATAATACTGAACCTGGAGGATGATCCTGCTTGCTTCTGTCTCTGGGAAGATCAACCAATTGATGCTAGCCAGAAGAAGTGGGCTGCCAGAGCATCCCACCTTACTTTATCCTTGGAAACAAATACTGGCACACTTGGGCATCAGAATTCTCTTGGATGGACTGCTGGATTTTGGAGATGTGTTGATCTGAAAGATGCTTGCATTGAAGTAGCTATGGCAACTGCTGATGGCAGCCCATTGTTAAAGGTTCCTCCTCCTGCCGGTATTGTGAGGGTCGGGGTTTCCTGTGAACAGTGTCTATCCAACACTTCCGTTGAACAATTATTTTTTGTCCTTGATCTCTATGATTATTTTGGGAGAGTTAGTGAAAAAATAGCGACATCTTGGGAAAGGAAACAAATGAATGACGTTAGGAATGAGTCTTCCAGTGGAAAGTTGTTGGATAAAGTTCCTAGTGATGCTGCAGTAAGTTTAGCCTTAAACAACCTCCAACTTCGATTTCTTGAATCTTCGTCTGTGAATGTCGAGGGAATGGCTCTAGTACAGTTTATCGGAGCTGATCTGTTCATTAGTGCCACTCATAGAACCCTCGGTGGTGCTATTGTTGTTTCATCCACTTTACATTGGGAGAGTGTTGAGATAGATTGTGTTGATTCTGAGGAGTATTTGGCATGCGAAAATGGCTCAGCGTTTAGTTCTGGGGAAAATGTTTCTTCAGTGAATGGTGTTGGATACCCTCAACTGAGAGCTGTTTTCTGGGTGGATAACAGTAATCATCTATCGAATGTAAATGCTCACTCAGTCCCATTTCTGAACTTAAGTATGAATCAAGTTATACCATTTTGTGAAGTAGAAAATGAGTCCAATATTTTGAATGTCTCCGCTTCTATATCTGGTGTTCGTCTTGGTGGGGGAATGAACTATGCTGAAGCCCTCCTGCATCGGTCTGGAATACTAGGGCCTGATGGGGGTCCAGGGAAGGGTCTTTCTAAAGGGTTGGAAAACCTACAAAAAGGACCATTGGCAAAACTTTTTAAGACAGCACCTCTAATTGTTGATAACTCAAAAAATGAAAGTACGATAGAAGGGATAGAAACTACTTTTCCACCCTTGAAGAAGCCAGATGATGTGGCTATAACTATAGAGTTGAGGGACTGGTTGTTTGCTCTTGAAGGTGCGCAAGATCTGGCTGAAAGATGGTGGTTCTCCAGCCAAGGAGATGTAGGAAGAGAACAGAAGTGTTGGCACACAACCTTCCACAGTTTACTAGTAAATGCAAAAAGTAGCCCAAAAAAGGTTTCAGGCGGCAAGCTGCATTCACATAGAATACAATATCCTCTAGAATTGGTTACGGTTGGAATTCAAGGGCTGCAGTTCTTGAAACCCACTACACAAAAAGATGTTCCGTCATCCATGTTAACTGCAAATGAAGTTAAAAAACTGACTGATGCGGATGGGGGAATCGGCCTTGAAGTGGGCTTGATATTACAGGAAAATAATATCGATGATGAAATGGCTAATTGGGAAGTGGAAAACTTAAAGTTCTCTATAAAGCAACCGTTCGAGGCTGTTGTAACCAAGGATGAGTTCCAGAGTCTCACTTTTTTATGCAAATCTGAAATTGAATCCATGGGCCGTATAACAGCAGGAATTCTGCGATTGCTTAAGCTAGAAGGTTCTGTTGGCCAGTCTGTAATGGATCAGCTAGGCAATCTAGGTAGCGAAGGTGTTGACAATGTTTTGTCGCCTGAAAAACTCAGCGAAGTCATTGACAATGTTTTGTCGCCTGAAAAACTCAGTGAAGGCATTGACAATGTTCTCTCGCCTGAAAAACTCAGCATCGATGGCAGCGTTTGCAACAGAGAACCTTCTCCATTACCAAATGGAATAAACGAAAGCCCACACAAATCTGTGGAACCAACAATAACTTTGCTTGAGGAAGCAGTTGTTGATTCACAGGCTAAGATTAATGCTTTGATAACTGATATTGGTACATCTGAGTCCTCCCTTCAGCACGTTGTTGAAGTTGTTAAACAATTAAGTGAAAAAATTGAGTTGATGCAAGGTTTATTGACGCAATTACGGAATCAACTTTGA 3666 0.4225 MESILARALEYTLKYWLKSFTRDQFKLQGHTVQLSNLDINGDALHSSVGLPPALNVATAKVGKLEITIPSVSNNSDFKPSESPTSSTPTAASAKGSGYGFADKIADGMTIQIHTVNLLLETHGSACLEGAATWAPPMASITIHNLLLCTTNESWQVVNLKEARDFSSNKKYIYVFKKLEWESLSIDLLPHPDMFTDATLGSSQVGSNLRDDDGAKRVFFGGERFIEGISGEAYITVQRTELNSPLGLEVQLHVTEVVCPALSEPGLRALLRFMTGIYVCLNRGNVDFKAQQQSTEAAGRSRVSIVVDHIFLRIKDSGFQLELLMQSLFFSRASLSEGDNDSNLTRITIAGLFLRDTFSCPPCTLVQPSMQSVTEDAFQVPEFARSFCPPIYPLEEQQWQLIVGTPLICIHTLQIKPSPLPPSLASQTVIDCQPLMVHLHEESCLRISSFLADGIVVNRGDILPDFSVNSFIFTLKGLDTTVPLDKAQLDFCVSNTDDTDEFLFIGARLHIENLFVLDSPLMKLIILNLEDDPACFCLWEDQPIDASQKKWAARASHLTLSLETNTGTLGHQNSLGWTAGFWRCVDLKDACIEVAMATADGSPLLKVPPPAGIVRVGVSCEQCLSNTSVEQLFFVLDLYDYFGRVSEKIATSWERKQMNDVRNESSSGKLLDKVPSDAAVSLALNNLQLRFLESSSVNVEGMALVQFIGADLFISATHRTLGGAIVVSSTLHWESVEIDCVDSEEYLACENGSAFSSGENVSSVNGVGYPQLRAVFWVDNSNHLSNVNAHSVPFLNLSMNQVIPFCEVENESNILNVSASISGVRLGGGMNYAEALLHRSGILGPDGGPGKGLSKGLENLQKGPLAKLFKTAPLIVDNSKNESTIEGIETTFPPLKKPDDVAITIELRDWLFALEGAQDLAERWWFSSQGDVGREQKCWHTTFHSLLVNAKSSPKKVSGGKLHSHRIQYPLELVTVGIQGLQFLKPTTQKDVPSSMLTANEVKKLTDADGGIGLEVGLILQENNIDDEMANWEVENLKFSIKQPFEAVVTKDEFQSLTFLCKSEIESMGRITAGILRLLKLEGSVGQSVMDQLGNLGSEGVDNVLSPEKLSEVIDNVLSPEKLSEGIDNVLSPEKLSIDGSVCNREPSPLPNGINESPHKSVEPTITLLEEAVVDSQAKINALITDIGTSESSLQHVVEVVKQLSEKIELMQGLLTQLRNQL 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01766 1221 Coils Coil 1200 1220 - -
Vifa6g01766 1221 MobiDBLite consensus disorder prediction 75 93 - -
Vifa6g01766 1221 PANTHER UNCHARACTERIZED 1 1219 IPR026728 -
Vifa6g01766 1221 MobiDBLite consensus disorder prediction 75 95 - -
Vifa6g01766 1221 Pfam N-terminal region of Chorein or VPS13 1 70 IPR026854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01766 Vifa-Chr6 673603291 673617070 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01766 - - psat:127101966 2209.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01766 6 673603291 673617070 Vifa6g01766 6 673603291 673617070 ECH