Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01739 ATGCCAACCACCACGTTGTCCTCTGTTCCCAACACCGTAGAGAAGGACTTCCAATCTCCGCTCTTGCCGCCGCCTGACGACGAGTCCATACCGGAGAAACTGTGCATCGACGAGATGCTTCAGAGTTACTGCGGGGAGTTTGGGCGATGGCAGTTGACGCACTTCGTACTAACGAGTCTGGCGTGGGCGTTGGAAGCTTTCCATACCATGATAATGATATTCGCCGACCGTGAACCGGAGTGGAGGTGTCTTGGTGGTGCTGCCGGTCTGGGTTGTGACCCTGCGGCTAAGAGTGTGTGTGAATTTGAACCGGGTTCGTGGGAATGGGTGGAAGGTGTGGCTTCCTCGACTGTCGCGGAATGGGGTTTGGTTTGTGGTGATAAGTATAAGGTTGGTTTGGTTCAAGCCGTGTTTTTCGCTGGCTGTATGTTTGGTGCTGGATTATTTGGTCACCTCTCAGATTCATTTCTAGGAAGAAAAGGATCTCTCATAGTTGTTTGCATCCTAAACAGCATCTTTGGCACCTTAACAGCATTTTCCCCCAACTACATCGCTTACTTCATCCTCCGCTTCCTCACCGGTTGCAGCACAGGCGGTGTCGGCCTCTGCGCCTTCGTCCTCGCCACAGAGCCCGTAGGTTCCACAATGCGTGGCGCAGCTGGTATGTCCACCTTCTATTTCTTCTCCATGGGCATTGCAGTTCTCTCCGGCATAGCATATATCTTCCCAACATGGCGTGACCTATACATAGCCTCCTCTATCCCCTCCCTCTTGTTCCTCGTCTTCGTCCTCCCTTTCATCTCTGAATCCCCTCGTTGGTACCTTGTTCGAGGACGAATCAAAGAAGCCATGAAAATCATGTCCAATATAGCTACCTCTAATGGCAACGACCTTCCACGCCGTGTTTCTCTTACACTCGACGAAGAATCATCATCATCATCATCGTTTTATAGCAGTACAGAAGACAAAGATGCAGTGTCAGGCTCTCTCGTGGATGTGATCCGTTCACCAATAACAAGAACGCGCTTGGTTTTAGCAATAATCATCAACTTGTTATGCTCAGTGGTGTACTATGGTCTAAGCCTAAACGTAGTAAACCTCGAAACAAACCTTTACCTCAACGTAATACTCAACTCGGTCGCAGAAATGCCAGCATTCATGATAACAGCAATGTTGTTGGATAAGTTAGGAAGGAAGCCATTAACAATAGGGACATTATGGTTCAGTGGGTTTTTCTGTTTTGTTGGGAGCTTGATGACAAATAAGGGAATATGGAAAGGAGTGAAAATGGTATGTGGAATTTTGGGAATATTTGGGATGGCAGGGACTTATAATTTGCTCTTTATTTACACAGCAGAGTTGTTTCCAACTGTTGTTAGAAATGCTGCACTTGGGAGCGCTACACAGGCAGCACAAATGGGCGCAATATTGGCACCAGTTATTGTCGTTATGGGTGGATCGTGGCCTTTTGCTTTATTTGCTTTATGTGGAATTGTTGCTGGTCTTTTCGCATTTTGCTTGCCGGAGACGCTAAACCAACCACTCTATGATACACTAACTGGAATGGAGGCGGCAGTGGAAAAAAATATGAACACTGACAACACTACTGTATGA 1614 0.474 MPTTTLSSVPNTVEKDFQSPLLPPPDDESIPEKLCIDEMLQSYCGEFGRWQLTHFVLTSLAWALEAFHTMIMIFADREPEWRCLGGAAGLGCDPAAKSVCEFEPGSWEWVEGVASSTVAEWGLVCGDKYKVGLVQAVFFAGCMFGAGLFGHLSDSFLGRKGSLIVVCILNSIFGTLTAFSPNYIAYFILRFLTGCSTGGVGLCAFVLATEPVGSTMRGAAGMSTFYFFSMGIAVLSGIAYIFPTWRDLYIASSIPSLLFLVFVLPFISESPRWYLVRGRIKEAMKIMSNIATSNGNDLPRRVSLTLDEESSSSSSFYSSTEDKDAVSGSLVDVIRSPITRTRLVLAIIINLLCSVVYYGLSLNVVNLETNLYLNVILNSVAEMPAFMITAMLLDKLGRKPLTIGTLWFSGFFCFVGSLMTNKGIWKGVKMVCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGSATQAAQMGAILAPVIVVMGGSWPFALFALCGIVAGLFAFCLPETLNQPLYDTLTGMEAAVEKNMNTDNTTV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01739 537 MobiDBLite consensus disorder prediction 1 26 - -
Vifa6g01739 537 MobiDBLite consensus disorder prediction 1 15 - -
Vifa6g01739 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 47 518 - -
Vifa6g01739 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 54 512 IPR020846 GO:0022857
Vifa6g01739 537 Gene3D MFS general substrate transporter like domains 107 518 IPR036259 -
Vifa6g01739 537 ProSitePatterns Sugar transport proteins signature 1. 389 405 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vifa6g01739 537 Pfam Sugar (and other) transporter 128 516 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vifa6g01739 537 SUPERFAMILY MFS general substrate transporter 127 515 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01739 Vifa-Chr6 651198411 651205749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01739 15 537 Organic Solute Cotransporters AT3G20660 66.350 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01739 K08202 - gmx:100805613 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01739 6 651198411 651205749 Vifa6g01739 6 651198411 651205749 ECH