Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01733 ATGGCATTCTTCAACACACTTCACTCTCTCCTCTCCCTCTCTCTCCTCCTTCTCCTCTCCTCCCATCTTTCTCTCTCCTCCTCTTCCTCCATTCATGACCTTCTCCGCTCAAAAGGCTTACCAGCTGGTCTCTTACCAGAAGAAGTAAAATCCTACACTTTCTCAGAAAATGGCCACTTAGAAGTGTTCCTTGAATCACCTTGTTTAACAAAGTACGAAAATAGAGTCTACTTTGAACAAATAATCACTGCCAATCTCACATATGGTAGCCTCATTGGTGTTGAAGGTTTACAACAAGAAGAGCTTTTTGTTTGGTTACCTGTTAAAGATATCATTGTTGATGATCCTTCTTCTGGCTTGATTCTCTTTGACATTGGTCTTGCGTATAAACAACTCTCTTTCTCTCTCTTTGAAGTTCCACCTCATTGTAAACCTCAAGGTGTGTTGAAGAATGGTGTGAGAAAGGAGAAAGGTTTTGAGGCAGTGAGGTAG 492 0.4146 MAFFNTLHSLLSLSLLLLLSSHLSLSSSSSIHDLLRSKGLPAGLLPEEVKSYTFSENGHLEVFLESPCLTKYENRVYFEQIITANLTYGSLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAYKQLSFSLFEVPPHCKPQGVLKNGVRKEKGFEAVR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01733 163 PANTHER T31J12.3 PROTEIN-RELATED 19 144 IPR007493 -
Vifa6g01733 163 Gene3D - 18 148 IPR036758 -
Vifa6g01733 163 SUPERFAMILY At5g01610-like 7 146 IPR036758 -
Vifa6g01733 163 Pfam Protein of unknown function, DUF538 32 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01733 Vifa-Chr6 650466622 650467664 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01733 - - mtr:25492948 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01733 6 650466622 650467664 Vifa6g01733 6 650466622 650467664 ECH