Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01579 ATGAAAAGAGAGTGTCATCCATTGTTGAGAGGTGTGAGAGCTAACAAATACAAACATGGTTTTTCTGTAGCTGAGATGGATTCACTCACAAGCATATGTGAAGCTGTTTTTCCTTCATTGCCAATGGATGATGATGATGAGTCAAACAACGATGTCAAATCTTTCTTCAACCTCTCTGCTTCTCAGTATCCATTACCTCACGAGGTTGCTGAGACGTTAGTAAAGAGAGGTTTAACAGAAGCAGTGATATTGATTAGAGTGATTCTATTGCTTCTGTCCACGAGGTTTGGGACTTTTTTGATTTGTGGTTTTCTCTGTCTTAGTAAGAAATGGCCATTTATCAACAATTTTTCAAGCTTGTCTTTGGATCAAAGAGAAAAGATTGTGCAGAGGTGTCTCAAGCTTAGGTTCTTAACTCCTATAAGACTCGCATTTGTTTACATCAAAATCCTATGTCTCTTCGGTTTCTTCTCTCGGGTTGATGAAAATGGCGATAATCCAGCATGGAAAGCCATTGGATATGATATATCATCATCTGGTGAGGAAATGAGCAATCTCGGCGATAAAAAGAGACCTTTAGAAAATGGGATTATAGAAACCATGCATGAAAATGACACGACTCTTGAACAATCTCTATCAAACAAAGGTCTCAATGTTAGATTTGATTCCAAAAACAACATCCTCAAAATCAAATGTGATGCAGTAATTGTTGGTTCTGGCTGTGGAGGAGGAGTAGCGGCTTCTGTGCTTTCAAAAGCGGGCCACAAAATCATTGTTCTAGAGAAAGGAAACTACTTTGTTCCTAAAGATTATTCATCGCTAGAAGGTCCTTCGATGGATCAACAATACGAATGTGGAGGCATGTTAGCTTCTGCTGATTCAAGAATGATTGTTTTAGCAGGTTCAACCGTTGGTGGGGGTTCAGCTGTTAATTGGTCAGCCTGTATAAAAACACCAAAAGAAGTGTTGAAAGAATGGGCAAAGAAACACAAACTTTCGCTCTTTGAAAGCTTTGAGTATCTATCTGCAATGGAAACTGTGTGTGAGAGAATTGGTGTGAACGAAAATTGTACACGAGAAGGGTTTCAAAATCAAGTACTGAGAAAAGGATGTCAAAATCTCGGATTAAAAGTTGATTATGTTCCAAGAAACTCGTCCGGGAATCATTATTGTGGTTCATGTGGTTATGGTTGTAGAAAAGGTGAGAAACAAGGGACTCAAGCTACATGGCTTGTAGATGCTGTTGAAAATGGTGCAGTGATAATAACAGGATGTAAAGCTGAGAGGTTTTTGTTCGAAACTAATAACCGAAATGGAAGTATAAGAAACAAGAAATGTTTGGGAGTGTCGGCCAAGATTTTAAACAGTAGAGTCACAATGAAGCTAGAGATTGAGGCCAAAGTGACAGTTTCTGCTGGTGGGGCAATTATGACACCTCCATTGATGATTTCTAGTGGTTTAAAGAATAGAAATATTGGTAGAAATCTTCATCTTCACCCTGTGTTAATGACATGGGGTTACTTTCCAGAATCAAATTCAGATTTCAAAGGTAAAGCATATGAAGGAGGAATAATCACATCTGTTCATCAAGTACAATCATCAAGTGATGATTCAGATTCAGATACAAGGGCAATAATCGAAACACCATTACTAGGACCAGCATCATTAGCAACACTATGTCCATGGGAATCAGGCCATGACTTGAAACAAAGAATGCTAAAGTATCCAAGAACATCACATTTAATAACAATAATAAGAGACAAAGCAAGTGGACAAGTAACAAAGGAAGGAAGAATAAGCTACAAACTGAATTCAACCGACAAAGAGAATATGAGAAGTGGTTTACAACAAGCAGTAAGGATTCTAATAGCGGCCGGAGCAGTTGAAGTAGGAACACACAGAAGTGATGGACAGAGAATCAAGTGTAATGAGAATATTAGTGAAAAGGAAATTGAAAAGTTTATAGATAGTGTTTGTCCTGTGGAAGCAGCATTGTCACCAGGTGAGAATTGGAATCTATATACTTCTGCTCATCAAATGGGAAGTTGTAGAATGGGTGTGAATGAAAAGGAAGGTGGTGTCGATGAAAATGGTCAGAGTTGGGAAGCTCAAGGACTGTTTGTTTGTGATGCAAGTTTGCTTCCTAGTGCTGTTGGTGTTAATCCTATGATTACTATTCAATCAACTGCTTATTGTGTATCAAACCGAATTCTTGATTATCTTGGAAAGGGTACTCAAGTATCATAA 2247 0.3827 MKRECHPLLRGVRANKYKHGFSVAEMDSLTSICEAVFPSLPMDDDDESNNDVKSFFNLSASQYPLPHEVAETLVKRGLTEAVILIRVILLLLSTRFGTFLICGFLCLSKKWPFINNFSSLSLDQREKIVQRCLKLRFLTPIRLAFVYIKILCLFGFFSRVDENGDNPAWKAIGYDISSSGEEMSNLGDKKRPLENGIIETMHENDTTLEQSLSNKGLNVRFDSKNNILKIKCDAVIVGSGCGGGVAASVLSKAGHKIIVLEKGNYFVPKDYSSLEGPSMDQQYECGGMLASADSRMIVLAGSTVGGGSAVNWSACIKTPKEVLKEWAKKHKLSLFESFEYLSAMETVCERIGVNENCTREGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCRKGEKQGTQATWLVDAVENGAVIITGCKAERFLFETNNRNGSIRNKKCLGVSAKILNSRVTMKLEIEAKVTVSAGGAIMTPPLMISSGLKNRNIGRNLHLHPVLMTWGYFPESNSDFKGKAYEGGIITSVHQVQSSSDDSDSDTRAIIETPLLGPASLATLCPWESGHDLKQRMLKYPRTSHLITIIRDKASGQVTKEGRISYKLNSTDKENMRSGLQQAVRILIAAGAVEVGTHRSDGQRIKCNENISEKEIEKFIDSVCPVEAALSPGENWNLYTSAHQMGSCRMGVNEKEGGVDENGQSWEAQGLFVCDASLLPSAVGVNPMITIQSTAYCVSNRILDYLGKGTQVS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01579 748 SUPERFAMILY FAD/NAD(P)-binding domain 230 743 IPR036188 -
Vifa6g01579 748 PIRSF Lg_Ch_AO 8 747 IPR012400 GO:0046577
Vifa6g01579 748 Pfam GMC oxidoreductase 595 732 IPR007867 GO:0016614
Vifa6g01579 748 Pfam GMC oxidoreductase 233 501 IPR000172 GO:0016614|GO:0050660
Vifa6g01579 748 Gene3D - 568 740 IPR036188 -
Vifa6g01579 748 Gene3D - 218 543 IPR036188 -
Vifa6g01579 748 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 17 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01579 Vifa-Chr6 579659524 579662097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01579 6 747 Acyl Lipid Metabolism Gene Families AT4G28570 56.627 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01579 K17756 - ag:CAP15762 1136.32