Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01482 ATGTTTTGGTTAAGACCTATTTTGCGTTCACAACCAAGATCTTCTTACGGATACTGCACTTCCTCCGCCGCTGCAATTCAAGCTGAAAAAACCATTCAACATGGACCCAGAAACGATTGGACCAAAGATGAAGTCAAATCCATCTACGACTCTCCCATTCTCGATCTTCTCTTCCACGGGGCTCAGGTTCATAGACATGCTCATAACTTTAGGGAAGTGCAACAGTGTACTCTTCTATCTGTGAAAACAGGTGGGTGTAGTGAGGATTGTTCTTATTGTCCTCAATCCTCTAGATATGATACAGGTCTCAAAGGTCAAAGACTTATGAACAAGGAGGCTGTTCTTCAAGCTGCACTCAAGGCAAAAGAGGCTGGGAGTACTCGCTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGAAAGACTAACTTCAATCAGATACTTGAATATGTTAAAGAAATAAAGGGAATGGGAATGGAGGTGTGTTGTACCCTTGGCATGCTGGATAAAGATCAAGCTGGTGAACTCAAGAAGGCGGGTCTTACTGCTTACAATCACAATCTCGACACTTCCCGGGAATATTATCCAAACATCATCACAACTAGGAGTTATGACGAGCGCCTTCAAACTCTTGAATATGTTCGTGATGCAGGGATTAATGTTTGCTCTGGAGGAATTATCGGGCTTGGAGAAGCTGAGGAAGACCGTGTAGGTTTGTTACATACATTATCAACACTTCCTACACATCCAGAGAGCGTTCCTATTAATGCACTTGTTGCTGTCAAGGGAACCCCTCTTCAGGATCAGAAGCCTGTTGAAATATGGGAGATGATTCGCATGATTGCGACAGCGCGTATAACAATGCCAAAAGCAATGGTGAGGTTATCAGCCGGCAGAGTTCGGTTCTCCGTGCCTGAGCAAGCATTGTGTTTTCTTGCTGGTGCCAATTCTATCTTTGCTGGTGAAAAGCTTCTCACAACTGCTAACAATGATTTTGATACTGATAAACTCATGTTTAAAGTTCTCGGTCTCCTTCCAAAAGCTCCAACCTTAGACGAAGATGAAACTAGCGAGACAGAGAACTATAAAGAAGCTGCTTCTTCTAGTTGA 1113 0.434 MFWLRPILRSQPRSSYGYCTSSAAAIQAEKTIQHGPRNDWTKDEVKSIYDSPILDLLFHGAQVHRHAHNFREVQQCTLLSVKTGGCSEDCSYCPQSSRYDTGLKGQRLMNKEAVLQAALKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKEIKGMGMEVCCTLGMLDKDQAGELKKAGLTAYNHNLDTSREYYPNIITTRSYDERLQTLEYVRDAGINVCSGGIIGLGEAEEDRVGLLHTLSTLPTHPESVPINALVAVKGTPLQDQKPVEIWEMIRMIATARITMPKAMVRLSAGRVRFSVPEQALCFLAGANSIFAGEKLLTTANNDFDTDKLMFKVLGLLPKAPTLDEDETSETENYKEAASSS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01482 370 SMART BATS_2 255 347 IPR010722 -
Vifa6g01482 370 Pfam Radical SAM superfamily 82 241 IPR007197 GO:0003824|GO:0051536
Vifa6g01482 370 PIRSF Biotin_synth 20 353 IPR024177 -
Vifa6g01482 370 Gene3D Aldolase class I 37 349 IPR013785 -
Vifa6g01482 370 SFLD biotin synthase 32 352 IPR024177 -
Vifa6g01482 370 PANTHER BIOTIN SYNTHASE 20 368 IPR002684 GO:0004076|GO:0009102
Vifa6g01482 370 SFLD Radical SAM 32 352 IPR007197 GO:0003824|GO:0051536
Vifa6g01482 370 SUPERFAMILY Radical SAM enzymes 38 347 - -
Vifa6g01482 370 ProSiteProfiles Radical SAM core domain profile. 71 300 IPR007197 GO:0003824|GO:0051536
Vifa6g01482 370 Pfam Biotin and Thiamin Synthesis associated domain 255 345 IPR010722 -
Vifa6g01482 370 Hamap Biotin synthase [bioB]. 38 348 IPR002684 GO:0004076|GO:0009102
Vifa6g01482 370 CDD Radical_SAM 83 283 - -
Vifa6g01482 370 SMART MiaB 76 284 IPR006638 GO:0003824|GO:0051536
Vifa6g01482 370 FunFam Biotin synthase 37 350 - -
Vifa6g01482 370 NCBIfam biotin synthase BioB 39 345 IPR002684 GO:0004076|GO:0009102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01482 K01012 - gmx:100808225 657.907