Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01456 ATGATTGTAGCTAGACATTTCTCCCCTTCAAAGGTTAAAACGCTCTATTATTTATCACTCTTTTCCCACTGCAAAAACCATCTTTTTACAACCTCAACACCAAACTCCCATCTCTATACCCTTACAACATCATGTAATTTCTTTCGCTATTTCTCTTCACAAAAGTTGCCCTTCTCTCGCGAGGGTAATTACGATGAAGCCACTTCCCAATCTCTTCATGTCTGCCCTGGTTGTGGGGTTTGTATGCAAAATTCCAACCCAAAACAACCTGGTTATTTCATTAAACCGTCTGAGAAAGACCTAAATTATAAAATGTACACCCATCTTGAACCCGTTGCAGCAGAGCCCGAATTCTCTAACACTGTTAAAAAAGGGTTTGTCATTGAACCACAAAAGCTTGACACTGTTACTGACACTGACTTGGTTACGAAACCGGAAAAGCCAGTGGTATGCGCACGCTGTCATTCGTTGAGGCACTATGGGAAGGTCAAGGATCTCTCTCTGGAGAATTTGTTACCGGATTTCGACTTCGATCATACAGTCGGGAGAAAGTTGGCATCAACCAGCGGGACACGTTCAGTGGTGCTTATGGTTGTGGATGCAGTGGATTTTGACGGCTCGTTTCCAAGGAAAGTTGCAAAGTTGGTTTCTAAGACAATTGAAGATAATTCTTCTGCGTGGAAGCAGGGTAAGTCAGGGAATGTGCCTAGAGTAATACTTGTAGTTACAAAGATTGACTTGTTGCCTAGCTCATTGTCGCCCACGAGATTGGAGCATTGGATTAGGCAAAGAGCTAGAGAGGGTGGTATTGTTAAGATTACTAGTTTGCATATGGTGAGTGCGTTAAGAGATTGGGGACTTAAGAATCTTGTGGATGATATTGTTGGTTTAGCTGGATCTAGAGGGAGTGTGTGGACTGTTGGGGCACAGAATGCAGGAAAGAGCACATTAATTAACTCTATAGGAAAACACGTTGGGGGGAAGATTACACATCTGACTCAAGCACCTGTTCCGGGTACTACACTCGGCATTGTTAGAGTCGAGGGCGCTCTTCCAAGTCAGGCTAAATTATTTGACACACCCGGCCTTCTCCATCCTTACCAGATTACAACAAGGTTGATGAGGGAAGAGCAAAAGCTTGTTTATATGACCAGGGAGTTGAAACCTAGGACATATAGAGTTAAGGCTGGTCATTCGATTCACATAGCTGGTCTTATGAGATTGGATGTAGAAGAGACGTCCCTCGATACTATCTATGTTACGGTGTGGGCGTCTCCTTATCTTCCTCTGCATATGGGTAAAGTAGAAAATGCAACTAAAATGTTCCATGAACATTTTGGACACCAGTTACAGCCACCAATTGGAGAAAAACGAGTCGAAGAATTGGGGAATTGGGTTAGAAGGGAATTTCATGTTGGTGGAAACAGTTGGGACTCGAGTTCTGTAGACATTGCTGCTGCTGGCCTTGGTTGGTTTGCCATTGGACTTAAAGGAGAAGCCGTGTTGGGTGTTTGGACTTATGAAGGAGTTGATGTTGTTCATCGAAATTCGTTGATACCCTATAGATCAAATACTTTTGAAGTCACAGGATTTACCGTATCGAAGATTGTCTCACAGTCTGACCGAGCTTCAAATAAGCCACGTCAACAAAATGACAAGAAGACAAAGCGGATTGAATCAAAACCGCTATCCAGTTCGGTCGAATCAGCACTATTGACCTCCGAATGA 1728 0.4329 MIVARHFSPSKVKTLYYLSLFSHCKNHLFTTSTPNSHLYTLTTSCNFFRYFSSQKLPFSREGNYDEATSQSLHVCPGCGVCMQNSNPKQPGYFIKPSEKDLNYKMYTHLEPVAAEPEFSNTVKKGFVIEPQKLDTVTDTDLVTKPEKPVVCARCHSLRHYGKVKDLSLENLLPDFDFDHTVGRKLASTSGTRSVVLMVVDAVDFDGSFPRKVAKLVSKTIEDNSSAWKQGKSGNVPRVILVVTKIDLLPSSLSPTRLEHWIRQRAREGGIVKITSLHMVSALRDWGLKNLVDDIVGLAGSRGSVWTVGAQNAGKSTLINSIGKHVGGKITHLTQAPVPGTTLGIVRVEGALPSQAKLFDTPGLLHPYQITTRLMREEQKLVYMTRELKPRTYRVKAGHSIHIAGLMRLDVEETSLDTIYVTVWASPYLPLHMGKVENATKMFHEHFGHQLQPPIGEKRVEELGNWVRREFHVGGNSWDSSSVDIAAAGLGWFAIGLKGEAVLGVWTYEGVDVVHRNSLIPYRSNTFEVTGFTVSKIVSQSDRASNKPRQQNDKKTKRIESKPLSSSVESALLTSE 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01456 575 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 53 562 - -
Vifa6g01456 575 MobiDBLite consensus disorder prediction 546 561 - -
Vifa6g01456 575 MobiDBLite consensus disorder prediction 539 575 - -
Vifa6g01456 575 Gene3D - 182 366 IPR027417 -
Vifa6g01456 575 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 408 IPR027417 -
Vifa6g01456 575 Pfam 50S ribosome-binding GTPase 305 374 IPR006073 GO:0005525
Vifa6g01456 575 CDD YqeH 151 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01456 Vifa-Chr6 523605488 523607508 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01456 - - gmx:100787200 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01456 6 523605488 523607508 Vifa6g01456 6 523605488 523607508 ECH