Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01438 ATGAGGAAGAAGCAAAATGGGTTTAGAAGGCCTGTTGTCATCAAGAACAAGAGGAATAGTAAGCAACCAGAGTCACAGCCTAGTGTTGATCCCATTACGGGGAAGAAGATACCGAAAAGTTTTGTTTTTGCACGAGGGAAGTTGCCTGTCCCTCTTAAACAGCTTCAGATGGACCTTAGGAAGTTGATGCTTCCTTATACTGCACTCAGTCTCAAGGAGAAGAAACGGAATAGTCTGAGAGACTTTTTGAACGTTGCTGGACCAATGGGCGTTACACATTTCCTCATATTGTCAAAAACTGCATCTGCGCCTTACTTGAGGGTTGCAACTACCCCACAAGGACCTACTCTTACATTTAAGATACAAGAATACGCATTGGCTGCTGATATTGCTCGATCTCAATTGCATCCTCGATGCCCTAAAGATCTTTTTAAAAATTCTGCATTGATTGTGCTTTCTGGATTTGTCAGTGGAGATTTACCTTTACGGCTTACAACTAACATGTTCCAGAATATTTTTCCAACAATCGACGTTAAAACTGTCAAACTCGCTTCTTGCCAAAGAATTGTGTTGCTTAATTACAACAAAGACACTAAGCTCATTGATTTTCGGCATTATTCGATTAGACTACAACCTATAGGTGTTTCACGGAGAATTAGAAAACTTGTTCAAAGCCATCAGGTTCCTGATCTGAGGAATCTTCAAGACGTGAGCGATTTTGTCACAAAGGCTGGCTATGGATCAGAAAGTGAAGCAGATGAAGAAGCAGCAACAGTGACTTTGTCTAGTAATATTGGTAGAGTTAACCGGGCTGCTACAAAAAGTGCTGTAAGACTTCAAGAGATTGGTCCAAGGATGACTCTTCAACTCGTTAGGATTGAGAAGGGATTGTGTTCGGGTGAAGTCCTCTTCAGCGAATCTGCGTCAGGAAAACCTGGTGACAAAGGAAAAACTGATGATGAGATGGACAATAATGACGAAGATTCAGAAGGCGGTGAAGATGATGATCAAGATGAAGATGGAGATGGAGAAGATCTAGAGGATAATGAAAATGATGAAGAGCTTGATTAG 1071 0.4127 MRKKQNGFRRPVVIKNKRNSKQPESQPSVDPITGKKIPKSFVFARGKLPVPLKQLQMDLRKLMLPYTALSLKEKKRNSLRDFLNVAGPMGVTHFLILSKTASAPYLRVATTPQGPTLTFKIQEYALAADIARSQLHPRCPKDLFKNSALIVLSGFVSGDLPLRLTTNMFQNIFPTIDVKTVKLASCQRIVLLNYNKDTKLIDFRHYSIRLQPIGVSRRIRKLVQSHQVPDLRNLQDVSDFVTKAGYGSESEADEEAATVTLSSNIGRVNRAATKSAVRLQEIGPRMTLQLVRIEKGLCSGEVLFSESASGKPGDKGKTDDEMDNNDEDSEGGEDDDQDEDGDGEDLEDNENDEELD 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01438 356 ProSiteProfiles Brix domain profile. 38 299 IPR007109 GO:0006364|GO:0019843
Vifa6g01438 356 MobiDBLite consensus disorder prediction 1 33 - -
Vifa6g01438 356 MobiDBLite consensus disorder prediction 1 16 - -
Vifa6g01438 356 Pfam Brix domain 51 292 IPR007109 GO:0006364|GO:0019843
Vifa6g01438 356 PANTHER PETER PAN-RELATED 15 351 IPR045112 -
Vifa6g01438 356 SMART Brix_2 41 293 IPR007109 GO:0006364|GO:0019843
Vifa6g01438 356 MobiDBLite consensus disorder prediction 304 356 - -
Vifa6g01438 356 MobiDBLite consensus disorder prediction 323 356 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01438 K14859 - gmx:100800809 553.903