Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01437 ATGCCTCCGGCGCGTCGACGCGTAGCAAACAAGGCTAAGGCGAACGGACACTTGCGTTTAGGCGATCTCGTACTCGCTAAGGTCAAGGGTTTCCCTCCTTGGCCTGCCAAGATAAGTAGGCCTGAGGAATGGGACAAAGCCCCTGATCCAAAGAAATTTTTTGTTCAATTCTTTGGCACCAAAGAGATAGCTTTTGTTGCACCCGCAGATATTCGGGTCTTTACAAGTGAGGATAAAATTAATATGTCTTCTCGGCTTCAAGGAAAGACGAGGTACTTTACCCAAGCTGTGAAGGAAATATGTGCAGCTTTTGATGAGATTCAGAAACAGAAGGCCAGTGGTGATGACACGGATGATTCTCGAATTGATTCAGAAGCTCCTCCTGTTGATGAGATAGTGAGTAATCCAAAGGATACCTCTGATGCTGTGACGTCTCATGCAGAAAAGGATAACATCCATGTGAGTAATGTTGGCTCCAATTCGGAGGAATGTTTGCTGAAAACCAGAGAGAGGGTTAGCCTAGATGAAAAGCTTACAGAGTCTGACCGTCCAAATGAAAGTTCTTCTGTTTCATCACCTTTGGTCAAAAGTAAATTATCCACTGGTCCAGAGATAAAGAATTCTAGCAAATCTACTCTTAAAGGTGCAAGTAATGTTAATGATTTTGGCCAACATGATAACGAAAATAGTATTTCAGCAAATGGTAGTAAGCCAAGAAAGCTTGTTACTGGTTCAAAGAGGAGACGTGAAGTTGAAGATGACATAAATAAAAATGGTGGATCATCTACTGGAACACTTTTAATAGTGGGAAAATCTACTGGCAGTGCTGATCTTTTCAGGCCAGGAGAAGAGACATTTAATTCTGGAAAGAAAGGGAAAGATGCATCTGCTGTTAAATTAAATTCTCCAGGCACTTTTAAACCAGACTCAAATGGTAGTACTGGTGAAAAAGGTAAGAACTTGATTTCAAAAAAAACGAGTCTCGAGGTAAAAAATGAATTACAGGAGGCTGATGGCAAAACTTCAAGTATAGGAAAGAATAACCAAGTTCATGCAAAGCATAATGTGGTAGCAAGTGAATCCTTACATGCTATGAAGAAGTTGAAACGCATGGATGCCAGAGATGATTTAGCTTCAGGGCACATCCCAAAAGATGTGAAAACTGTTTTGCCTTGCTCTAGTTTTGTTGAAGACAAATCATCTAAAATGTTAGAGTTGAAAAGGTCCACATTAAATTCAAAAACAGAAAAAAGCTCTGTCCATGAGTTGCTACCTATGATCAAACAACATAGCCAAGTTCAGAAAACTATGCTTGGTTCTGATAAAGTTGCTTCTGATGATAAAAAAGTTTGGAACAATCTTAAACTGAAAGGTGATGCAAAGAATGTTACGACAAAACAAGCACAAAAGAAACGTAAAGCTGTTTGCCTCAATGAAGATGATGATGTACCTAAAACGCCTGTTCATGGAGGAGCTGCAAAAAATATTAAGTCGCCTTTTGCTTCAGATGTCAAGAATGGAAATAATGCACATTCTGAGAAATCTGATGCTGCTAAGCTGGCTCACAGAAATTCTAGTGAACTTGAGGAAGGTCATTTGAAAGAACCATCTTCTCAATTACATGTTGATGCATCATCAATTAAGCCCCCTGAAAAAGAGAAAGCCGATGAAGCCACTCCCGTGCACATTCCTCTTAGTCAGGATAAGTTAGATTCAAAGCAGTTTCCCTCCAAGGTGACAAGAGTAAGCTCTGCCTCCCCAGTAAAATCACCTCAGCCAGTTCCTGCAACAACAAAGTCAAATGCTGAGCGGAATAAATCTTCCATACCTTTGCTTAAAGCTTCCAGCATTGCTACTCCAAAGAAGGCTGATAACGGGTCTTCCAAATCTTCACATAACCTCAGCTCTTCTCAAAACCAAGTTTCTGCTCATAAGAAGAAGCTAGCATCTTCAGCTGAAAATTCCAAGACTACTCCAAAGACATTGCCTCAGGAAGTTGACATTCCTTCAGTAGATTTTAAGGAGCCTGATGCACTACATGTTGATAGATTGGAAGAGGGTATGGAAGAAAGAAGTAATATACATACTGGTTCTGGGACTCCAGAAACATCTAAGACTATGAAGCATCTTATTGCAGCTGCCCAGGCAAAATGGAAAAAAGCTCATTCTCAGTATCTTTCTTCTGATATTCATAATGTCCAGGAGGGGACTCCTAGCCCATCCATAGTTCAGCCATTTCTCCCCGTCTCAAGAAACTTCGCACAGACAGATGTGCAGGGAGTTTACGAGCTCACAACTTCGGCTTCTCCACCAACTAATGACTATCACTCTGCATCTCAAAATCAGCTCGATGCGGATGAGATTGAAGAGAGGAGAGTCAGTTCAGTGCAAAGGGGTCCTGAAGGTTCCCTCAGTGGTGGTACAGAGGCTGCTGTTGCTCGTGACGCTTTTGAAGGAATGATAGAAACTTTGTCAAGGACCAAAGAAAGTATTGGGCGTGCAACTCGTCTTGCCATAGATTGTGCTAAGTATGGCATTGCCAACGAGGTTGTTGAACTTCTCATCCGGAAGTTGGAAAGTGAAGCTAGTTTTCATCGCAAAGTGGATTTATTTTTTCTTGTTGATTCTATCACTCAGTGCTCACACAGTCAAAAAGGAATTGCTGGAGCTTCTTATATCCCTATAGTTCAAGCAGCGCTGCCACGTCTTCTTGGCGCTGCTGCTCCCTCTGGAACTAGTGCCCGTGAAAATCGTCGTCAATGTCACAAGGTTTTGAGGTTGTGGCTTGAGAGGAAAATTTTGCCGGAGTCTGTTATACGCCGTCACATGAATGAAATTGGGGTTTTAAATGATGATATCTCAGTTAGCTTTTCCTTTAGGCGTCCGTCTCGTGCCGAGCGATCTCTGGATGACCCTATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCGACATTTCAGCTGCCTGGCTTTTTATCTTGTCATGCGTTTGATGAAGATGAAGATGAAGAAGATTTACAAATCAATTCATGTATGGATATGTATGGTACATCTCCAGCAGATCCCGCACCCAAGTTTGGAGGATCAGATACTCATACTGTGACCCCAAATGACAAACGTCATTGTATCTTGGAGGATGTGGATGGTGAGCTAGAAATGGAAGATGTTTCAGGTCACCCAAAGGATGAGAGACCTGTATATTTCAACAGTTCTGATGAAACAAATATGCTTCTTCAGAGCTCAAATAGGACTTCAGACCCAACTTCAAATATTTCAGAAGACATATTGGCAACTCCGGAGGGTTCCCCTCCATTACCTTTTGATTCACCCCCTTCAACCCCTCCTTTGCCTTCTTCACCTCCCCCTCCTCCTCCTCTGTCATCTCCATCTCCTCCCCCACCCCCACCACCTCTAATGTTACAACCCGGACCTCTTCCTTTACCATCCTCAGCCCCACTAGTATCATCGGTTCCTCAATCAACTGTACTGCCCCGGCCTTCTCATGTCTCCCAGTCATTAATGCCACCTCAGTCATCATATCAGTCATCACCAAAGTTGGGGTATCAGCAGAACATACCTCACGACTTTAGTAGCTCAACTAGTGGTAACCAAATAGTTCAAATGGCTGGTAATTCTTTTTCCGGAGGTCACACTACTGCAGTTGTCAAGAATGAACTATTTCCACAGCCATCTGCATTTACATTGGCTGCAGGATGCAGCTCCCAGGAGCCCTCTGGTTTTAACCCTTCAAGACAATTAGATTACGGACATAATGATGTGTATTTAAATGCTCAAGTTCATCAACCTAACCAGCAATATCAGCAGGGTAACATCCCATATGCTCAGAGACATGCACCTCCTGCCCCACCCCAAAATCCATCGAATCAGTTCTCATATCCAAATCACACAGTTCAGCAACACCTTCCACATGCATTTCATCCTCCTTTTCCTTTACCATCTCTTCCGGATGGCCTGAGGCAATTTGTTGCTGATGAGCAATGGAGAATGTCATCGACAAACAATCAACATCAAAATGGTGTATGGAGAGGAATAAGTCCTTCGTGCCCTGGTCCACCCTTTGGGCAAGAAGGTTTCCGACCACCACTTGAAAGGCCGCCGCTAAGTAATGTAGGTTTTCAGCGAGCAATTTCAAGCACCCTACCTAGTGCACCAGTGCCAGGACACGGTGCTCCTCAGATGTTGCCTTGCAGGCCAGACATTTCTGCTGTTAATTCTTGGAGACCCACTTGA 4263 0.4309 MPPARRRVANKAKANGHLRLGDLVLAKVKGFPPWPAKISRPEEWDKAPDPKKFFVQFFGTKEIAFVAPADIRVFTSEDKINMSSRLQGKTRYFTQAVKEICAAFDEIQKQKASGDDTDDSRIDSEAPPVDEIVSNPKDTSDAVTSHAEKDNIHVSNVGSNSEECLLKTRERVSLDEKLTESDRPNESSSVSSPLVKSKLSTGPEIKNSSKSTLKGASNVNDFGQHDNENSISANGSKPRKLVTGSKRRREVEDDINKNGGSSTGTLLIVGKSTGSADLFRPGEETFNSGKKGKDASAVKLNSPGTFKPDSNGSTGEKGKNLISKKTSLEVKNELQEADGKTSSIGKNNQVHAKHNVVASESLHAMKKLKRMDARDDLASGHIPKDVKTVLPCSSFVEDKSSKMLELKRSTLNSKTEKSSVHELLPMIKQHSQVQKTMLGSDKVASDDKKVWNNLKLKGDAKNVTTKQAQKKRKAVCLNEDDDVPKTPVHGGAAKNIKSPFASDVKNGNNAHSEKSDAAKLAHRNSSELEEGHLKEPSSQLHVDASSIKPPEKEKADEATPVHIPLSQDKLDSKQFPSKVTRVSSASPVKSPQPVPATTKSNAERNKSSIPLLKASSIATPKKADNGSSKSSHNLSSSQNQVSAHKKKLASSAENSKTTPKTLPQEVDIPSVDFKEPDALHVDRLEEGMEERSNIHTGSGTPETSKTMKHLIAAAQAKWKKAHSQYLSSDIHNVQEGTPSPSIVQPFLPVSRNFAQTDVQGVYELTTSASPPTNDYHSASQNQLDADEIEERRVSSVQRGPEGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLESEASFHRKVDLFFLVDSITQCSHSQKGIAGASYIPIVQAALPRLLGAAAPSGTSARENRRQCHKVLRLWLERKILPESVIRRHMNEIGVLNDDISVSFSFRRPSRAERSLDDPIREMEGMLVDEYGSNATFQLPGFLSCHAFDEDEDEEDLQINSCMDMYGTSPADPAPKFGGSDTHTVTPNDKRHCILEDVDGELEMEDVSGHPKDERPVYFNSSDETNMLLQSSNRTSDPTSNISEDILATPEGSPPLPFDSPPSTPPLPSSPPPPPPLSSPSPPPPPPPLMLQPGPLPLPSSAPLVSSVPQSTVLPRPSHVSQSLMPPQSSYQSSPKLGYQQNIPHDFSSSTSGNQIVQMAGNSFSGGHTTAVVKNELFPQPSAFTLAAGCSSQEPSGFNPSRQLDYGHNDVYLNAQVHQPNQQYQQGNIPYAQRHAPPAPPQNPSNQFSYPNHTVQQHLPHAFHPPFPLPSLPDGLRQFVADEQWRMSSTNNQHQNGVWRGISPSCPGPPFGQEGFRPPLERPPLSNVGFQRAISSTLPSAPVPGHGAPQMLPCRPDISAVNSWRPT 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 570 664 - -
Vifa6g01437 1420 ProSiteProfiles CID domain profile. 809 950 IPR006569 -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 789 808 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 109 160 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 1082 1100 - -
Vifa6g01437 1420 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1058 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 184 239 - -
Vifa6g01437 1420 SMART PWWP_4 18 75 IPR000313 -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 1156 1206 - -
Vifa6g01437 1420 Pfam PWWP domain 21 104 IPR000313 -
Vifa6g01437 1420 SMART 558neu5 816 947 IPR006569 -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 472 487 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 175 352 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 1082 1206 - -
Vifa6g01437 1420 Gene3D - 808 951 IPR008942 -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 1107 1155 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 337 352 - -
Vifa6g01437 1420 Gene3D - 10 115 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 462 674 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 303 321 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 509 537 - -
Vifa6g01437 1420 FunFam Enhancer of ag-4 2 809 952 - -
Vifa6g01437 1420 SUPERFAMILY Tudor/PWWP/MBT 13 109 - -
Vifa6g01437 1420 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 322 336 - -
Vifa6g01437 1420 MobiDBLite consensus disorder prediction 109 126 - -
Vifa6g01437 1420 Pfam CID domain 816 940 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01437 Vifa-Chr6 522150074 522159699 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01437 - - gmx:100810034 1423.3