Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01432 ATGGCAGGAACAGCAACAGGGTGTTACAAGTGTGGCAAACCAGGTCACTGGTCACGCGACTGCCCTTTCTCCGCTCCCGATTCAAATTCAAACCCTAACCCTAACTCCAACACCGCCGATCTTCCTCCTTCCTCTTCCTCCAACCCTCTCGGCCCTAGATCCGCCATCGAGAAGCCCAAAAAAACCCCCCGTATCCGCCCCAAACTCACCCCCGGGCTTCTCCTCTCCGACGACGGCCTTGGTTATGTCCTTCGCTATTTCCCTCGCTCCTTCAAATACCACGGTCGCGGCCACGAGGTTCGTGACTTGGGTAACCTGATTGAATTGTACTCTGAATGGCACTCTCGTTTGCTCCCTTATTACCCTTTCAATCAATTTGTTCACAAAGTTGAGCAAGTTGCTGCTACAAAGCATGTCAAGATGAGCCTTAGAGAATTGAGAGAAAGAGTTGCAAATGGTGGGGATCCATCTAAATTGCACGAACCACCAGGTGTGCAAAACTCCCCAGTTGCTGAGCAAGAAAATGGGGACGTAACTCATCAAGAAAATGAGATGTTTGATGAACCTGAAAATGTTATTGACATTCAGGAAGACATGCTCAATGATATATATGACAAAGCTACCAAGGAACCTTCTCAGCCCATGCAAAATGTGATCGGTGTGAGTACAGATCCCGAAAGCAGCGCAATTGAAAAGACATCAAATGAAGCCCCAAATAATGGAGCCAGTCTGTCCAGCAATGCTGAGATAACAGCAGAGCAGCGAGCCCGTATGGAAGCAAATAGGTTGAAGGCAATCGGAAAGAAATCAAATGAAGTCCCAAATAATGGAGCCAGTCTGTCCAGCAATGCCGAGATAACAGAAGAGCAGAGGGCCCGAATGGAAGCAAATAGGTTGAAGGCACTAGAAAGGCGCGCGGCCAGAGCCAGCCTATCACAGGCTTCCTAG 948 0.4895 MAGTATGCYKCGKPGHWSRDCPFSAPDSNSNPNPNSNTADLPPSSSSNPLGPRSAIEKPKKTPRIRPKLTPGLLLSDDGLGYVLRYFPRSFKYHGRGHEVRDLGNLIELYSEWHSRLLPYYPFNQFVHKVEQVAATKHVKMSLRELRERVANGGDPSKLHEPPGVQNSPVAEQENGDVTHQENEMFDEPENVIDIQEDMLNDIYDKATKEPSQPMQNVIGVSTDPESSAIEKTSNEAPNNGASLSSNAEITAEQRARMEANRLKAIGKKSNEVPNNGASLSSNAEITEEQRARMEANRLKALERRAARASLSQAS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01432 315 MobiDBLite consensus disorder prediction 215 244 - -
Vifa6g01432 315 MobiDBLite consensus disorder prediction 272 287 - -
Vifa6g01432 315 MobiDBLite consensus disorder prediction 152 177 - -
Vifa6g01432 315 Gene3D - 4 68 - -
Vifa6g01432 315 PANTHER TIMELESS INTERACTING-RELATED 3 311 IPR040038 GO:0000076
Vifa6g01432 315 MobiDBLite consensus disorder prediction 23 52 - -
Vifa6g01432 315 SUPERFAMILY Retrovirus zinc finger-like domains 6 24 IPR036875 GO:0003676|GO:0008270
Vifa6g01432 315 Coils Coil 284 304 - -
Vifa6g01432 315 Pfam Zinc knuckle 7 22 IPR001878 GO:0003676|GO:0008270
Vifa6g01432 315 Pfam Replication Fork Protection Component Swi3 68 149 IPR012923 GO:0005634|GO:0006974|GO:0031297
Vifa6g01432 315 SMART c2hcfinal6 7 23 IPR001878 GO:0003676|GO:0008270
Vifa6g01432 315 ProSiteProfiles Zinc finger CCHC-type profile. 8 22 IPR001878 GO:0003676|GO:0008270
Vifa6g01432 315 MobiDBLite consensus disorder prediction 21 70 - -
Vifa6g01432 315 MobiDBLite consensus disorder prediction 264 291 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01432 K10998 - gmx:100799216 380.178