Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01427 ATGGAAGTGTCATGGCTGAGTGCAATTTTGGTCGGCGCCGGTTATCTCGCATTCGGTTACTTCATTGGTTCTCACTATCCCCATCGTTTCTTTTTCTCCAATAGATTTTCATCCCCTAAAGACAAAGATGCTTCACTTCTCAATCACGACAAGAACAGTAAGCAGAAGAAGAATAGTAAGCCCAAAATCAAAGATTCACTTGAGGTTGAACAGCTCGCGGAAATTCTCGAGGATTTTAAGATGATACTTGTTGTTAGAAATGATCTTAAAATGGGTAAAGGAAAGATTGCAGCTCAATGCAGTCATGCAACGTTGGGACTGTACAAAAAGGTTCTTTATCGAGCTCCAAAGGCTTTAAATAGGTGGGAGATGTCTGCACAGCCCAAGGTTGTTGTCAAAATTGAAAGTGAAGAGGATATGCTGGCTTTGCAAGCAAGGGCTAAATCTCTTAAGTTACCTACTCATATCACAATTGATGCTGGTCGAACACAGATTGCACCGAATTCCAGAACGGTGATGGCGATTCTCGGACCTGTTGAAGTGGTAGATGAGGTAACAGGTGGACTGAAACTTCTTTAG 579 0.4214 MEVSWLSAILVGAGYLAFGYFIGSHYPHRFFFSNRFSSPKDKDASLLNHDKNSKQKKNSKPKIKDSLEVEQLAEILEDFKMILVVRNDLKMGKGKIAAQCSHATLGLYKKVLYRAPKALNRWEMSAQPKVVVKIESEEDMLALQARAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGGLKLL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01427 192 CDD PTH2 79 192 IPR002833 GO:0004045
Vifa6g01427 192 Gene3D Bit1 77 192 IPR023476 -
Vifa6g01427 192 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 77 192 - -
Vifa6g01427 192 NCBIfam aminoacyl-tRNA hydrolase 80 192 IPR002833 GO:0004045
Vifa6g01427 192 PANTHER PEPTIDYL-TRNA HYDROLASE 2 14 192 IPR002833 GO:0004045
Vifa6g01427 192 MobiDBLite consensus disorder prediction 43 63 - -
Vifa6g01427 192 SUPERFAMILY Peptidyl-tRNA hydrolase II 78 192 IPR023476 -
Vifa6g01427 192 Pfam Peptidyl-tRNA hydrolase PTH2 79 192 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01427 Vifa-Chr6 520228067 520232444 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01427 K04794 - gmx:102664938 307.375