Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01422 ATGGCTTCCTTCAACACCATTTGGATTTTCTCTCTCGCTCTTCTCCTCACCGCTTCTCCTTTCCTCCAAGTTGTTAGGTGTCAGTCAGAATCAGGTGAAGCTGTGGAGACTACTGAGAGTGATATTGGAATTGTTGGTGATGATGCTCAAGACTTTGATAGTGTTGGAACCTTTTCTGCTGCTCCGGGGATTGATACGATAAGTGTGTTTCCGAAAAATATTGCAAAATTGGTTACAGCTGGAGACGATACCGAGCTGCTAGTCGGTGTAAAAAATGATGGTGAGTCCAGCTTGAATGTTGTTGCGATCAAGGCCAGTATTCACCTTCCTGTTGATCATCGTCTGCTTGTTCAGAATCTTACCGCTCAGGTTTTCAACAATGGTTCTGTACCAGCCTCAGCGCAAGCTACTTTCCCATACATATTTGCAGTCAGTAAATTCTTGCAGCCTGGAAGTTTTGATCTTGTTGGCACTATTATCTACGAGATAGACGAGCATCCATACCAAAGCACCTTCTTTAATGGCACTATTGAAGTCGTTGAATCCGGTGGGTTTCTTAGCATCGAATCTGTTTTTCTTGTCACTCTTGGAGCTGCCCTCCTTGTCCTCCTGGGGCTATGGATTCATGGTCAAGTACAAAACCTATCTAAGAAATCAAAAAGAGCTCCCAAAGTTGAAGTTGGAACTAGGTCTATAGATGCTTCAACAGACGAATGGCTACAGGGAACTGCATATACTCAGTCTCTTTCCAGCAAATCAAAGAAGAAGAAGTAG 774 0.4354 MASFNTIWIFSLALLLTASPFLQVVRCQSESGEAVETTESDIGIVGDDAQDFDSVGTFSAAPGIDTISVFPKNIAKLVTAGDDTELLVGVKNDGESSLNVVAIKASIHLPVDHRLLVQNLTAQVFNNGSVPASAQATFPYIFAVSKFLQPGSFDLVGTIIYEIDEHPYQSTFFNGTIEVVESGGFLSIESVFLVTLGAALLVLLGLWIHGQVQNLSKKSKRAPKVEVGTRSIDASTDEWLQGTAYTQSLSSKSKKKK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01422 257 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 9 256 - -
Vifa6g01422 257 Pfam Translocon-associated protein (TRAP), alpha subunit 42 243 IPR005595 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01422 Vifa-Chr6 517770668 517779168 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01422 K13249 - gmx:100777232 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01422 6 517770668 517779168 Vifa6g01422 6 517770668 517779168 ECH