Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01410 ATGGCAAGTGTTTCGTCTGAAGACGTTTCTGAGAGATGTGGGAGTTATAGTCCGAGTGCTGACATCAGCGAATCGGAAAGTTCTAGTAGCTTCTACGGTCGCCGTTTCGATGCCGAGGGAGCTTCCAGCTCTGCTAATCTCTCGCCGCGTCAACTCGCCGCGCATTTCAACTTACCCACGGCGGCGCAACTCATGCTTCCCGTTATCGGTGGTAAAGACGTCGTCGTTTGGGATCATAAGCGTGACCTGGATTTGTCCGAAGTTGAATTGATGAAGGAAAGATTCGCTAAGCTGCTTTTAGGAGAAGACATGTCTGGTGGTGGAAAGGGGGTTTGTACTGCACTTGCGATCTCTAACGCAATCACGAATCTCTCTGCAACTGTGTTTGGAGAGTTATGGAGGTTGGAGCCACTAGCACCACAGAAAAAAGCAATGTGGCGAAGGGAAATGGAATGGCTTCTTTGCGTGAGTGATTCCATTGTTGAGCTTGTGCCTTCTGTGCAGCAGTTTCCAGGTGGGGGGACTTATGAAGTGATGGCGACGCGGCCGAGGTCTGATTTGTACATCAATCTTCCTGCTTTGAAGAAGCTTGACGGGATGTTGATAAGTATGCTGGATGGGTTTTGTGATACACAGTTTTGGTATGTTGATAGAGGGATTGTGTTAGCTGATTCTAAGGATTGTGATGACTATGGTAGACCTTCTGTTAGGCAAGAAGAGAAATGGTGGCTTCCTTCTCCTAAGCTTCCGCCAAATGGGTTGTGTGAGGATGATAGGAAAAGGTTGCAACAGTGTAGGGATTGTACTAACCAGATACTTAAGGCTGCCATGGCAATTAACAGTTCTGTTCTTGCTGAAATGGAAATTCCTGCTGCTTATGTAGAATCCTTGCCCAGGAATGGCAAAGCTTGTTTAGGGGATATAATTTATCGATACATTACTGCTGGCCAGTTCTCACCTGAATGTCTTCTTGATTGCCTGGATCTATCATCTGAGCATCACACACAGGATATAGCTAATAGAATTGAGGCTGCTATACATGTATGGAGGTTGAAAGACCTGCAGAGACTTAAAAATTCAGCAAAAGCCCGACGGTCTTGGAGTGGAAAGGTAAAGAGCCTTGTTGCTGACGGTGAGAAGAACCATTTTCTCGTCCAACGGGCAGAGACACTACTGCAAAGCTTGAAACACCGGTTTCCTGGGCTTCCTCAAACAGCACTAGATATGGCCAAGATACAATACAATAAGGATGTAGGACAGTCCATTCTTGAAAGTTATTCCAGGGTGACAGAGAGCTTGGCTTTTAATGTAATGGCCAGAATCGATGATGTCCTTTATGTAGACGATACTATAAAACGATGTGCAGCTGCAGATTCTATCTTGTTTGGCAGGGGAGGTTTTGGTGGTATGCCTATCCAGAAGCGAATGACTCCCAGCCCTTTCTCAATTCAACACACCCCATTCGCCTCTCCTTTTGCCACCCCAACATTCTGTTCCTCTTCTCCTGCTAGTGGGAGCCCTTGCAGTCCACGTAGGACACACACTGTCAAGTGGAATGCCAAAGGAAAAGATTCCAAGGCTGAAAAGTTGGCCTCAACTGATTATGAGAAGGTATGGTCATACACCGGAAACCTCAGTGTAAGAAGAGTTTCCGGCGAGGCTCCAGAAAGAAACTAA 1677 0.4651 MASVSSEDVSERCGSYSPSADISESESSSSFYGRRFDAEGASSSANLSPRQLAAHFNLPTAAQLMLPVIGGKDVVVWDHKRDLDLSEVELMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLISMLDGFCDTQFWYVDRGIVLADSKDCDDYGRPSVRQEEKWWLPSPKLPPNGLCEDDRKRLQQCRDCTNQILKAAMAINSSVLAEMEIPAAYVESLPRNGKACLGDIIYRYITAGQFSPECLLDCLDLSSEHHTQDIANRIEAAIHVWRLKDLQRLKNSAKARRSWSGKVKSLVADGEKNHFLVQRAETLLQSLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVTESLAFNVMARIDDVLYVDDTIKRCAAADSILFGRGGFGGMPIQKRMTPSPFSIQHTPFASPFATPTFCSSSPASGSPCSPRRTHTVKWNAKGKDSKAEKLASTDYEKVWSYTGNLSVRRVSGEAPERN 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01410 558 Gene3D PRONE domain, subdomain 1 314 457 - -
Vifa6g01410 558 Gene3D PRONE domain, subdomain 1 78 313 - -
Vifa6g01410 558 ProSiteProfiles PRONE domain profile. 78 458 IPR005512 GO:0005085
Vifa6g01410 558 FunFam Rop guanine nucleotide exchange factor 14 320 457 - -
Vifa6g01410 558 FunFam Rop guanine nucleotide exchange factor 1 79 319 - -
Vifa6g01410 558 MobiDBLite consensus disorder prediction 1 27 - -
Vifa6g01410 558 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 86 452 IPR005512 GO:0005085
Vifa6g01410 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 17 481 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01410 Vifa-Chr6 514719844 514722503 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01410 - - gmx:100789706 954.896