Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01405 ATGAGAGGAGTAAGAATGCACAGAAAAACAGACTCGGAAGAAACCACCAACAGCAATGAACAATCTTCCTCCTCTCCGCCGCGTTCACCTCCGCGGCGGCCACTTTACTACGTCCAGAGTCCTTCAAACCACGACGTTGAGAAAATGTCTTACGGTTCAAGTCCTATAGGTTCACCACCTCATCAAAACTTCCACTACTATACCGCTTCTCCCATTCATCACTCTCGCGAATCTTCCACCTCTCGTTACTCCGCTTCGCTGAAAAACCCTCGCAACATTTCAGCTTCCTCCTGGAAGAAACTGAATAACAGAAACAGTCTCGATGATCTTGATTTAGAGGAAGACGAAGATGATGAAGGTGTTTATGATAATACTCGTAATGTTCGGTTGTATTTTGGATTCTTCTTGCTTTTCGTGGTGCTTTTTACGCTCTTTTCGTTGATTCTTTGGGGTGCTAGTAAAACCTACAAGCCTCATATTGTTCTTAAGAGCATAGTGTTTGAGAATCTGAATGTACAATCTGGAAATGACGGAACGGGAGTACCAACGGATATGTTATCATTGAATTCAACGGTTAAGATCTTATACAGAAATCCTGCAACTTTTTTTGGTGTTCATGTCACGTCAACACCTCTGCAACTTAGCTATTACCAGCTCACACTGGCTTCTGGTCAGATGCAGGAGTTTTATCAATCAAGGAAGAGTCAGAGGAAGATATCTGTTGTGGTGTTTGCAAACCAAGTTCCACTCTACGGTGGGATCTCAGTTCTTGGAAGTAGTAACCCAGAACACATGAAGAGTGTTGTATTACCAATGAATCTAACATTTGTAGTGAGATCAAGAGCTTATGTTTTGGGAAGATTGGTTAAATCTACATTCCATCGGAGAATCAGATGTTCAATCACTATCCATGGCAACAAACTTGGAAAACATCTTAATTTGACTGATTCATGTGTCTACAAGTAA 966 0.4161 MRGVRMHRKTDSEETTNSNEQSSSSPPRSPPRRPLYYVQSPSNHDVEKMSYGSSPIGSPPHQNFHYYTASPIHHSRESSTSRYSASLKNPRNISASSWKKLNNRNSLDDLDLEEDEDDEGVYDNTRNVRLYFGFFLLFVVLFTLFSLILWGASKTYKPHIVLKSIVFENLNVQSGNDGTGVPTDMLSLNSTVKILYRNPATFFGVHVTSTPLQLSYYQLTLASGQMQEFYQSRKSQRKISVVVFANQVPLYGGISVLGSSNPEHMKSVVLPMNLTFVVRSRAYVLGRLVKSTFHRRIRCSITIHGNKLGKHLNLTDSCVYK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01405 321 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 131 306 - -
Vifa6g01405 321 MobiDBLite consensus disorder prediction 1 15 - -
Vifa6g01405 321 MobiDBLite consensus disorder prediction 1 55 - -
Vifa6g01405 321 Pfam Late embryogenesis abundant protein 194 300 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01405 Vifa-Chr6 512520508 512527786 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01405 - - tpra:123913707 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01405 6 512520508 512527786 Vifa6g01405 6 512520508 512527786 ECH