Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01404 ATGGGAAAAGTGGCTGATGAATCTGAATATTTGAGAACAGAAGTAGCACTGTTACAGTTCTCTGATGCTAATTTCAAACCTCCATTATCTCCCTTGTTCATACATATTCATGACGATCATCAAACCGATACTACTAGTTTTGGTTCAGAATCTGAGCCATCATCAGAACAGCAGCAGAATGAACAACAACAACATCCAAAAGATGAGTGGCTTCCACTAACTGAATCAAGAAATGGAAATGCGTATTATGCAGCTTTTCATATTCTTAATTCCAACATCGGTTTTCAAGCTCTCGTGCTTCCTGTTGCCTTTGCCACTCTTGGTTGGAGTTGGGGTAGTGTGTGTTTGTCAATAGCATTCATTTGGCAACTTTATACAATATTTCTTCTAATTGACCTTCATGAATCTGTCTCTGGAAAACGTCAAAGTAGATATCTTTTCCTTGCAATGTCTGCGTTTGGTGAAAAATTAGGAAAAGTAGCAGCATTGTTTCCAGTAATGTACCTATCAGGAGGTAGTTGTGTAATGTTTATAATCACTGGTGGTGGGACAATGAAACAACTATTCAAGATTCTCTGCGAAAACCATAACGGGACAACATGCGACACGCACTCGCCAACCGGGGTGGAGTGGTTCTTAGTGTTTACATGTTTGGCAATACTCATTGCTCAGTTGCCTAATCTCAACTCAATGGCAGCTGTCTCTTTGGTGGGAGCTGCTGTCTCTATCAGTTACTGCACACTGTTTTGGTCACTTTCTGTTAAGAAAGGTAGGCCAGTGGGTGTGTCCTACAACACTACTTTGGTGCAACAAGAACAAACATTGGTGAAGATTAGTGACATTTTGAATGCTATAGGAATCATTGTGCTAGCTTTTCGAGGTCACAATGTTGTACTAGAAATTCAAGGGACTCTACCTTCAAATTTCAAAGAAACATCAAAAGAACTAATGCGTAGAGGAGTCACCATTTCATATATATTCATAGCCATGTGTGTCTTTCCGCTCTCAATTGCTGGATTTTGGGCTTATGGAAACCAGATACCTTCTGATAGAGGATTGTTAACAGCATTCTCACAATTCCACAAACAACAAGTAACAAAATTCTCAATTGGTGCAATCTATGTTCTAGTCATACTACATTGTTTGAGTAGCTTCCAAGTCTATGCCATGCCTGTTTTTGACAATTTGGAGCTAAGATACACAACCTTAAAGAATAAGAAATGTCCACGAATTGTGAGAACATGCTTTCGGTTATGCTTTGGAGCGTTCACATTTTTTATAGCAGTAACATTTCCTTTCTTGCCGAGCCTTGCAGCTCTGATAGGTGGAATGACCCTTGTGCCCCTCACATATGCATATCCTTGTTTCATGTGGCTAGCTATTAAGAAACCTCGTACAAGGGGTATAGTATGGTGCTTCAACCTCGTACTTGGTTGCTCAGGGATGGTTCTTAGTGTTCTTTTGGTGGCTGCTGCTATAAGGACTCTGGCAGATAAAGGGTTAAATGCTAATTTCTTCAAACCATGA 1527 0.4008 MGKVADESEYLRTEVALLQFSDANFKPPLSPLFIHIHDDHQTDTTSFGSESEPSSEQQQNEQQQHPKDEWLPLTESRNGNAYYAAFHILNSNIGFQALVLPVAFATLGWSWGSVCLSIAFIWQLYTIFLLIDLHESVSGKRQSRYLFLAMSAFGEKLGKVAALFPVMYLSGGSCVMFIITGGGTMKQLFKILCENHNGTTCDTHSPTGVEWFLVFTCLAILIAQLPNLNSMAAVSLVGAAVSISYCTLFWSLSVKKGRPVGVSYNTTLVQQEQTLVKISDILNAIGIIVLAFRGHNVVLEIQGTLPSNFKETSKELMRRGVTISYIFIAMCVFPLSIAGFWAYGNQIPSDRGLLTAFSQFHKQQVTKFSIGAIYVLVILHCLSSFQVYAMPVFDNLELRYTTLKNKKCPRIVRTCFRLCFGAFTFFIAVTFPFLPSLAALIGGMTLVPLTYAYPCFMWLAIKKPRTRGIVWCFNLVLGCSGMVLSVLLVAAAIRTLADKGLNANFFKP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01404 508 MobiDBLite consensus disorder prediction 46 67 - -
Vifa6g01404 508 PANTHER OS05G0424000 PROTEIN-RELATED 67 486 - -
Vifa6g01404 508 Pfam Transmembrane amino acid transporter protein 78 492 IPR013057 -
Vifa6g01404 508 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01404 Vifa-Chr6 511693065 511695002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01404 56 508 Organic Solute Cotransporters AT1G47670 50.331 4.48e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01404 K26385 - gmx:100817315 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01404 6 511693065 511695002 Vifa6g01404 6 511693065 511695002 ECH