Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01379 ATGGATACACTTCAAGCAACATACAAAGACGAAGAAGATGAAGACGAAGACCTTCCACTCGCCACCACAACCGCACCCACCGCCGACCAACCCGCTGCCTCCGTTGCCACCGATATGGAATCAACATACGCACCTCTCGTCACTGCCAGCACCCCTTCTGACACCCTCACCGAACCCCAAAACGATGGAAAATCGGAGCTCGATCCCTCCGATGATCTCTCCTCCGACGAAGCTGCATCAAACGGCTTGAATTCCCCAAAACAGAGTAGAGGAGACGCTGATGAAGATGAAGAAGAACCGCCTCCGAAGAAGCAGAAGCAACTGTCTTCTCTCGTCAAGGAAGAAGAATCGGTGTCATTGCCGGAGGAAAACAACGGGACGGGAAATGCTGCTGCGTCAACTGCAACGACATCGACGCCGGCAAACGGAACTGTGAAGAAATCGAAGAAAAAGAACAACAATGTGTGGGCAACGAAATCAACAAGGAAAGGGAAAAAGAAAAGCAAAAACAACAATAATAACAACAACCATCAAACAAATGGTGGAGAAGACAGCGTTCTGGTAACGCCGGTACCAAGGTTCCCGGATAAAACGGACGATACACCGGATATGAAGATATGTTTATCAAAGATATACAAAGCGGAAAAAGTAGAGTTGAGTGAGGATAGGTTGAGTGCAGGGAGCACAAAGGGTTATAGAATGGTTAGGGCAACAAGAGGGGTAACTGAAGGAGCTTGGTACTTTGAGATAAAGGTTGTGAGGTTAGGGAAGACTGGACACACACGTTTAGGATGGGCTATGGAGAAGGGTGATTTGCAGGCACCTGTTGGGTATGATGGGAATAGTTTTGGGTATAGGGATATTGATGGTAGTAAGATTCATAAGGCTTTGAGGGAAAAGTATGGTGATGAAGGTTATGGAGAAGGTGATGTTATTGGGTTCTATATTAATTTGCCCGATGGAGATAAGTATGCCCCGAAAAACAAGCAGTTGGTTTGGTATAAAGGACAAAGGTATGCATTTGCTCAAGATGCTAAGGAAGATCCACCCAAAGTTGTGCCTGGAAGTGAAATGTCTTTCTTTAAAAATGGTGTATGCCAAGGTGTTGCTTTCAAGGACCTCTATGGTGGTCGTTACTTTCCTGCTGCTTCAATGTATACTTTGCCAAATGAACCAAACTGCACAGTAAAGTTCAACTTTGGTCCTGACTTTGAATTTTTTCCTGAAGATTTCAATGAACGGCCAATTCCCAAGCCAATGATTGAAGTTCCTCATCATGGTTTTGACAATCAAGTTGAAAATGAGAAGAAATCAAATGGGGAGTCAGATGAGAAGAAATCAAATGGAGAGTCAGACGCGAAGAAATCCAATGGAGAATCAGAAGAAAATAAATCAAACGAAGGATCGGATGAGAAGAAATCAAATGGAGAGTCGGCCGAGAAGAAATCAAATGGAGAGTCGGTCGAGAAGAAATCTAATGAAGAGTTGGCCGAGAAGAAATCAAATGGAGAAGAAATCAAATGA 1524 0.4423 MDTLQATYKDEEDEDEDLPLATTTAPTADQPAASVATDMESTYAPLVTASTPSDTLTEPQNDGKSELDPSDDLSSDEAASNGLNSPKQSRGDADEDEEEPPPKKQKQLSSLVKEEESVSLPEENNGTGNAAASTATTSTPANGTVKKSKKKNNNVWATKSTRKGKKKSKNNNNNNNHQTNGGEDSVLVTPVPRFPDKTDDTPDMKICLSKIYKAEKVELSEDRLSAGSTKGYRMVRATRGVTEGAWYFEIKVVRLGKTGHTRLGWAMEKGDLQAPVGYDGNSFGYRDIDGSKIHKALREKYGDEGYGEGDVIGFYINLPDGDKYAPKNKQLVWYKGQRYAFAQDAKEDPPKVVPGSEMSFFKNGVCQGVAFKDLYGGRYFPAASMYTLPNEPNCTVKFNFGPDFEFFPEDFNERPIPKPMIEVPHHGFDNQVENEKKSNGESDEKKSNGESDAKKSNGESEENKSNEGSDEKKSNGESAEKKSNGESVEKKSNEELAEKKSNGEEIK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01379 507 MobiDBLite consensus disorder prediction 121 159 - -
Vifa6g01379 507 MobiDBLite consensus disorder prediction 89 120 - -
Vifa6g01379 507 SUPERFAMILY Concanavalin A-like lectins/glucanases 205 408 IPR013320 -
Vifa6g01379 507 Pfam SPRY domain 246 321 IPR003877 GO:0005515
Vifa6g01379 507 CDD SPRY_Ash2 217 404 - -
Vifa6g01379 507 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 49 439 IPR037353 GO:0048188|GO:0051568
Vifa6g01379 507 Gene3D - 204 419 IPR043136 -
Vifa6g01379 507 SMART SPRY_3 243 404 IPR003877 GO:0005515
Vifa6g01379 507 MobiDBLite consensus disorder prediction 415 507 - -
Vifa6g01379 507 ProSiteProfiles B30.2/SPRY domain profile. 186 405 IPR001870 -
Vifa6g01379 507 MobiDBLite consensus disorder prediction 74 88 - -
Vifa6g01379 507 FunFam Protein TRAUCO 205 418 - -
Vifa6g01379 507 MobiDBLite consensus disorder prediction 428 507 - -
Vifa6g01379 507 MobiDBLite consensus disorder prediction 171 185 - -
Vifa6g01379 507 MobiDBLite consensus disorder prediction 23 63 - -
Vifa6g01379 507 MobiDBLite consensus disorder prediction 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01379 Vifa-Chr6 474092412 474096640 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01379 K14964 - gmx:100796715 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01379 6 474092412 474096640 Vifa6g01379 6 474092412 474096640 ECH