Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01377 ATGTCGATCGCTTTTTCCTTCGTCCCCCCTTCTTCCCATTCTCTTTCTTCCCATTCTCCTTCCACTCCCAAATCCCTCCCTACCATTTCCTTCTCTTCATCTTCTCTCCACCTCCGTCTCACTCCATCTCCCTCTCCTTCTCTCCGCCTCAACCGCCGCATAGATCCTCTCTTCATTCTCCATTCCACCGATTCCGGCGGAGGCTTCGGCGGTCACGACGATGGCGGCTCGTTCGGCGGACACGGTGGCGGCGGCGGAGACGCCAATGACGGAGAAAACAATGACGGACATAACGTAGTTAACGAGGCGCTGTTATTGTTGGCGCAAGCAGGTAGGTCGTTGGAGAGTGTGCCGGCTGACCTAGCTTCTGCTATCAAGGCAGGGAAGATTCCTGCCTCCGTTGTTGCTCGGTTTCTCGAGCTTGAGAAGTCTCCGCTCATGCAGTGGTTGCTTAAGTTTACCGGTTTCAGAGAGCGCCTTCTCGCTGACGATCTCTTCCTTGCGAAGCTCGGTATGGAGTGCGGCGTTGGCGTCATTGCCAAGACTGCTGCTGAGTATGATCGCCGGAGAGAGAACTTTTTCAATGAGCTTGAAATTGTGTTCGCCGATGTGGTCATGGCAATACTCGCAGATTTCATGCTAGTTTATCTTCCTGCGCCTACTGTTTCTCTTAGACCACCACTGGGAGTTAGTGCAGGGGCTATTTCTAAGTTTTTCCACAACTGTCCAGATAATGCATTCCAGGTTGCTCTCTCTGGAACATCATATTCTGTCTTGCAGAGATTTGGTGCAATTGTGCGTAATGGGTCCAAGCTTTTTGCAGTTGGAACTGGCGCATCACTGGTTGGGACAGCTGTGACGAATGCCTTAATTAATGCAAAGAAGGCTGTTAACAAGTCTTCTGCAGAGGAAATTGAAAATGTTCCGATATTGTCCACCAGTGCTGCTTATGGTGTTTATATGGCAGTGTCTAGCAACCTCAGGTACCAAGTTCTTGCGGGAGTTATTGAACAGAGGGTTTTGGAACCTATGTTGCACCAGCACAAACTTATACTCGGTGCTCTTTGTTTTGCTGTTCGAACCGGCAATACATATTTGGGTTCATTATTATGGGTGGATTATGCTCGTTGGATAGGAGTGCAGTAG 1146 0.4974 MSIAFSFVPPSSHSLSSHSPSTPKSLPTISFSSSSLHLRLTPSPSPSLRLNRRIDPLFILHSTDSGGGFGGHDDGGSFGGHGGGGGDANDGENNDGHNVVNEALLLLAQAGRSLESVPADLASAIKAGKIPASVVARFLELEKSPLMQWLLKFTGFRERLLADDLFLAKLGMECGVGVIAKTAAEYDRRRENFFNELEIVFADVVMAILADFMLVYLPAPTVSLRPPLGVSAGAISKFFHNCPDNAFQVALSGTSYSVLQRFGAIVRNGSKLFAVGTGASLVGTAVTNALINAKKAVNKSSAEEIENVPILSTSAAYGVYMAVSSNLRYQVLAGVIEQRVLEPMLHQHKLILGALCFAVRTGNTYLGSLLWVDYARWIGVQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01377 381 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 25 381 - -
Vifa6g01377 381 Pfam Protein RETICULATA-related 158 335 IPR021825 -
Vifa6g01377 381 MobiDBLite consensus disorder prediction 70 95 - -
Vifa6g01377 381 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01377 Vifa-Chr6 473811108 473814326 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01377 - - gmx:100811998 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01377 6 473811108 473814326 Vifa6g01377 6 473811108 473814326 ECH