Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01370 ATGAATGGTAGTAGTGCAGCAGGTAAGGTTGTGTGTGTGACAGGTGCTTCAGGTTACATTGCTTCATGGCTTGTTAAGTTTCTTCTCCAACGTGGTTACACCGTTAGAGCCACGGTTCGTAATATAGATAATCCAAATAAGGTTGGTCACTTGCTTAAACTTGATGGTGCAAAGGAAAGGTTACAACTCTTTAAGGCTGATCTACTAGAAGAAGGTTCCTTTGATTCTGCTATTCAAGGTTGTCATGGTGTCTTTCATTCTGCTTCACCGGTTCAATTCGTTGTTGATGACCCTCAGACACAATTAATTGTTCCTGCTGTGAAGGGAACTCTTAATGTTTTGAAGTCATGTGCAAAATCGGCATCAGTTAAACGAGTTGTTTTAACTTCTTCTATTGCCACAGCTTTATACAACGGAAAGCCTCGAACACCAGAAGTTGTAGTTGATGAGACATGGTTTTCGAATCCAGAATTCTTATTCGAAAATAAGATTGGTATCAATTTGCTAAGACTTCAGCAGAGGAAGCTGCAAACAAATTTCTAA 543 0.3959 MNGSSAAGKVVCVTGASGYIASWLVKFLLQRGYTVRATVRNIDNPNKVGHLLKLDGAKERLQLFKADLLEEGSFDSAIQGCHGVFHSASPVQFVVDDPQTQLIVPAVKGTLNVLKSCAKSASVKRVVLTSSIATALYNGKPRTPEVVVDETWFSNPEFLFENKIGINLLRLQQRKLQTNF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01370 180 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 161 IPR036291 -
Vifa6g01370 180 Gene3D - 9 172 - -
Vifa6g01370 180 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 159 - -
Vifa6g01370 180 FunFam Dihydroflavonol reductase 8 171 - -
Vifa6g01370 180 Pfam NAD dependent epimerase/dehydratase family 11 144 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01370 Vifa-Chr6 471227949 471228648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01370 3 164 Miscellaneous Gene Families AT5G19440 70.988 7.95e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01370 - - gmx:100804704 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01370 6 471227949 471228648 Vifa6g01370 6 471227949 471228648 ECH