Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01357 ATGAACTGCAGCGTGGGATCCATCGTATGGGTTCGCCGGAGAAACGGGTCGTGGTGGCCGGGTCAAATACTCGGCACCGATGATCTGTCCACTTCTCATCTCACTTCTCCTCGTTCAGGAACTCCGGTTAAGCTCCTCGGAAGGGAAGACGCTAGCGTAGATTGGTACAATTTGGAGAAATCCAAACGTGTCAAGGCATTTCGATGCGGTGAGTTTGATGATTGTATTGAAAAAGTTGAATCCTCCCATGAGATGCCTTTGAAGAAAAGAGAAAAATACGCCCGCCGTGAAGATGCCATTCTTCATGCTCTTGAACTCGAGAGGCAGTTGGTGAAAAAGCAGGCAAAAGTGGCCATTGCTTCTGATCGAACCAATTGTAGATCGTCTGGTTCTGTTAAAAGGGGTACGGGAGTGTTGCCCGGGGAAACCAATGATACTGAAAAACATTTAAATTTGAAATCATATGTGTCTTGTGAAAATGAAGTTGCTGGAGATTGTTTTCCTTTGGAGGTAGCTGGGGATACCAAAGTAGATCTCTGCGATGTTACTCCTCGTACGAGAGGCTTGAAGGGTTATGGAACCAAAATTCCCCCCTTGAAAGAGAATCTCCCATCTCCCATACAAATGGAGCTAGGCAAATATCAACCCGAGAAAAGAGGAGCAGGGAAGTTTCCTTATCGCGGTTCTTTGGTTGGAGAGACTGAGTCAACTTTTATGGATGTTGAATCTGGCTCTTCAGAAACAGACTCTACTGTTTCTGATTCAGATTCTTCTGAGACAGAACCAGACACGGAAGCAAAGATGATACTCACAGAGACTGGCCGTGATTTTGAAGAACATGAAAGCACCAGCATTGAGGAGCTTGATGAATTAGCAGTCACCAGCGACATGCCTCACCTCTATCCTCGTGAACTGACATCTTGCCATGAAGCCATGTCTAAATGGCAACTAAAAGGGAAAAGGAATAATCGGACTCTTGTAAAGAGGTCTAATGGTCCCCCTGACGGAAAAAGTATTATATGTGAAGCGGAAGTGGATTTTGAAGATGGAAGACCTAATTTAAGTCACAAGAGAATGGGTTCAAGTTTGCATTGTTACAGAAATGATTTTAGTGATGCACTTTATGACGATGATCAAGAGTTTGGATCGGAAGAGGAATACTCTCCCACTCCGAGAGCTGTATCAAAAGTTCAAAATAGAACTCATCGAGGTGCTAATTGGAATGACTTGGCCTGGGATGAACATCTTGCTTCCAAAGAAATGCATAGTGATGGTTATCATATCGGTGGGAGGACGAGGTCGGTGCTGATTAACGTAGATGTGAAGGTTCAAGCAGGATATCGGAAGGAGCCTGTGCCCATTATTTGTCTCATGAGTAAATTAGATGGGAAGGCAATAATAGGGCACCCAATCCAGGTTGAAGTCCTCGAGGATGGTTCTTCTGATACCCTTTTTTCTGCAATTGATGACTTCAATTATGACGGGATTGGTCATGAGGAAAGCCGTGTGCTTCGACAAGGATGGAGCACTGCTAGGAGAACAGCAAATTTTCGTGTTCCTCGCTCAAACGTTTTGTCATCAAATGGTGCTGAAGTTCCCGTTGAGTTTCCCTCCTTAGATCAAGAACAAAGCTTTGATTATAAAAAACTAAACCCCGGAAGTTCCAGTCATAAGGCAAACCTCCAAAAGAAGAGTGGCAACAAAAAGTTCTATAAAAAGGCGCCAAAGAAATCGAGCTTGTCATCTAACCAGAAAATTAGAACTCTGTCCTCATTATCTATTGAGCATAGACTTAGGAATCCATTTCATGATATAAGTAGTTATCAAACTGATAGATTAATTAAACCAGAAATCTCTGGGCCCACCACAGTCGCTTGCATACCAGTCCAGTTAGTATTTAGTAGATTACTTGAGAAGATTAATAGGCCACCATTGAAAGCACCTTTGCTGAATACTGGTGTGGAGAGAAATTCATAG 1977 0.433 MNCSVGSIVWVRRRNGSWWPGQILGTDDLSTSHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIEKVESSHEMPLKKREKYARREDAILHALELERQLVKKQAKVAIASDRTNCRSSGSVKRGTGVLPGETNDTEKHLNLKSYVSCENEVAGDCFPLEVAGDTKVDLCDVTPRTRGLKGYGTKIPPLKENLPSPIQMELGKYQPEKRGAGKFPYRGSLVGETESTFMDVESGSSETDSTVSDSDSSETEPDTEAKMILTETGRDFEEHESTSIEELDELAVTSDMPHLYPRELTSCHEAMSKWQLKGKRNNRTLVKRSNGPPDGKSIICEAEVDFEDGRPNLSHKRMGSSLHCYRNDFSDALYDDDQEFGSEEEYSPTPRAVSKVQNRTHRGANWNDLAWDEHLASKEMHSDGYHIGGRTRSVLINVDVKVQAGYRKEPVPIICLMSKLDGKAIIGHPIQVEVLEDGSSDTLFSAIDDFNYDGIGHEESRVLRQGWSTARRTANFRVPRSNVLSSNGAEVPVEFPSLDQEQSFDYKKLNPGSSSHKANLQKKSGNKKFYKKAPKKSSLSSNQKIRTLSSLSIEHRLRNPFHDISSYQTDRLIKPEISGPTTVACIPVQLVFSRLLEKINRPPLKAPLLNTGVERNS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01357 658 Coils Coil 103 123 - -
Vifa6g01357 658 Gene3D - 1 119 - -
Vifa6g01357 658 MobiDBLite consensus disorder prediction 236 266 - -
Vifa6g01357 658 CDD PWWP 6 106 - -
Vifa6g01357 658 Pfam PWWP domain 6 90 IPR000313 -
Vifa6g01357 658 PANTHER T17B22.17 PROTEIN-RELATED 2 205 IPR044679 -
Vifa6g01357 658 MobiDBLite consensus disorder prediction 550 581 - -
Vifa6g01357 658 ProSiteProfiles PWWP domain profile. 5 60 IPR000313 -
Vifa6g01357 658 MobiDBLite consensus disorder prediction 380 399 - -
Vifa6g01357 658 SUPERFAMILY Tudor/PWWP/MBT 4 109 - -
Vifa6g01357 658 MobiDBLite consensus disorder prediction 236 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01357 Vifa-Chr6 467385261 467388373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01357 - - pcin:129315945 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01357 6 467385261 467388373 Vifa6g01357 6 467385261 467388373 ECH