Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01354 ATGCTTGGCTCCACGTGCTTTCGTTGGAATTCAATTACATACGATCAATCCTTTTCAAATCACCCTCAAATCTTCTCTCTTCCTTCTCCCATCCCTCAATGGCCTCAAGGACAAGGTTTTGCATCAGGAGTTGTGAATCTCGGTGAAATAGAAGTTTTCAAGGTCACAAAGTTTGATTTCATTTGGAGCAGTGCTATACTAGACCCAAGAAAAGCTGTTATATTCTACAAGCCTGTGGGAATACCTAACAGTTTCCATATCCTTGGTCACTATTGTCAAACCAGTGACAAGCCTTTACGGGGTTTTGTACTTGCCGGGAAGGAATCACAAACTTGCATGTCCGGAACTAATGAGGAAAAGTTACCTCCTCTGCGGAATCCCGTTGATTTTAAGTTAGTTTGGAGTTCGAATGAGCCTGATAGTCTTGAACTTTCAAGTGGATGTGGTTACTTCTGGCTACCCGAACCTCCCGAAGGTTACAAGGCTGTTGGCTATTTTGTTACAAATAAACCGAACAAGCCTGAGTTGGATGAAATGTGTTGTGTTCGTGCCGATCTAACTGATAAATGTGAACCTTATCGTGTAATGTTTGCTGTTAGTTCTAGAACTCCCGAGTTCTCGTTTCAGGTGTGGAGCTTAAGACCTTGTGACCGTGGCATGCTAGGGAAAGGTGTTTCTGTTGGGACTTTTCTCTGCTCTAGTGGTTTGAGCAATGAAGAAGAGTACCCTGTTGCATGCTTGAAAAACCTGAATTCTGCGCTACCATCAATGCCTAATCTGCAACAAATTCATGCACTTATTGAGCATTATGGTCCTACTCTTTTCTTTCATCCCGAGGAAATTTACTTGCCTTCTTCTGTTGATTGGTTTTTCAACAACGGAGCTCTTTTGTACCGGAAAGGTGTGTCTGCAGGAGAGGCAATCGATGCAGCCGGCTCAAATTTGCCGTGTGGAGGATCAAATGATGGCCAATTTTGGATAGACTTGCCCAGTGATGATCGGAGGGATTTCGTCAAACGCGGGGACTTAAAAGGTGCAAAGCTTTATATTCATGTGAAACCAGCTCTCGGTGGGACTTTTACAGACATTGCAATGTGGATATTTTGCCCCTTCAATGGGCCAGCCACTTTGAAAATTGGACTTAAGAGTATACCTTTGAGCAAGATTGGAGAGCATGTTGGTGACTGGGAGCATTTCACGCTTCGTATATGCAACTTCACCGGAGAGCTCTATAGTATATACTTCTCGCAGCACAGTGGCGGTGAATGGGTGGACGTGTGTGACTTGGATTATATTGATGGCAACAAAGCTATTGTTTACTCGTCAAAAAGCGGACATGCAAGTTACCCTCGTCCTGGAACATATATCCAAGGGTCTTCAAAGCTAGGACTTGGCATTAGGAACGACGCTGTTCGTAGTAATTTTTACGTGGATTCGAGTATCCATTATGAGATTTTTGCAGCTGAATATCTCGGAAATGCTGTCGCTGAGCCTAATTGGTTGCAGTTTATGAGAGAGTGGGGTCCCAAAATTGTTTATGATTCAAAAACTGAGTTGGATAGGATTATCAACGCGCTTCCTCACATGCTTCAGTCTTCAATGAGAAACTTGTTTAACAAGCTTCCAGTGGAGCTGTATGGTGAGGAAGGTCCTACTGGGCCAAAAGAGAAAAACAATTGGATACAAGATGAGAGATGGTGA 1701 0.4345 MLGSTCFRWNSITYDQSFSNHPQIFSLPSPIPQWPQGQGFASGVVNLGEIEVFKVTKFDFIWSSAILDPRKAVIFYKPVGIPNSFHILGHYCQTSDKPLRGFVLAGKESQTCMSGTNEEKLPPLRNPVDFKLVWSSNEPDSLELSSGCGYFWLPEPPEGYKAVGYFVTNKPNKPELDEMCCVRADLTDKCEPYRVMFAVSSRTPEFSFQVWSLRPCDRGMLGKGVSVGTFLCSSGLSNEEEYPVACLKNLNSALPSMPNLQQIHALIEHYGPTLFFHPEEIYLPSSVDWFFNNGALLYRKGVSAGEAIDAAGSNLPCGGSNDGQFWIDLPSDDRRDFVKRGDLKGAKLYIHVKPALGGTFTDIAMWIFCPFNGPATLKIGLKSIPLSKIGEHVGDWEHFTLRICNFTGELYSIYFSQHSGGEWVDVCDLDYIDGNKAIVYSSKSGHASYPRPGTYIQGSSKLGLGIRNDAVRSNFYVDSSIHYEIFAAEYLGNAVAEPNWLQFMREWGPKIVYDSKTELDRIINALPHMLQSSMRNLFNKLPVELYGEEGPTGPKEKNNWIQDERW 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01354 566 PANTHER BNAC01G40110D PROTEIN 1 566 - -
Vifa6g01354 566 Pfam Vacuolar protein sorting-associated protein 62 22 564 IPR009291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01354 Vifa-Chr6 466655139 466657118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01354 - - adu:107488453 874.004