Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa6g01311 | ATGGTTTCATTGAATGTAACAGAAAAGATGTCTGGTCAACTAGAGCATGAGTTGGAGCTTGATGTGCCAGCAAGTGAAGCATGGGAACTCTTTGGCACACTTGGTATTGGAAAACTCGTTTGTGAAGAGATGCCACAATTGTTTCAGAAGGTGGAAATAGTTGAAGGAGATGGAGGAGTTGGAACTATTCTCAAAGTCACATTCACTCCAGGTATACCTGGTCCAGCTAGTTACAATGAAAAGTTCACGAAGATTGATAATGAAAGGCGTATCAAAGAAGTAGAGGTGGTTGAAGGTGGATACCTGGATTTTGGATTTACACTATATAGAGTTCGTTTTGAAGTTATAGAGAAAGGTGAAGATTCGAGCATAATCAAATCTACAGTAGAGTATGAAGTTGAGGAAGCAGCTAAGGCTTCACTTGTTTCCATCGATCTATTGGCAAACATTGAACTAGTTGCTAAGAATTATCTAGGAAGAAACAAGGCTGCAAAAGAAGCAAAGTAG | 507 | 0.3945 | MVSLNVTEKMSGQLEHELELDVPASEAWELFGTLGIGKLVCEEMPQLFQKVEIVEGDGGVGTILKVTFTPGIPGPASYNEKFTKIDNERRIKEVEVVEGGYLDFGFTLYRVRFEVIEKGEDSSIIKSTVEYEVEEAAKASLVSIDLLANIELVAKNYLGRNKAAKEAK | 168 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa6g01311 | 168 | Gene3D | - | 1 | 163 | IPR023393 | - | |
| Vifa6g01311 | 168 | CDD | Bet_v1-like | 12 | 132 | - | - | |
| Vifa6g01311 | 168 | PANTHER | - | 14 | 137 | - | - | |
| Vifa6g01311 | 168 | Pfam | Pathogenesis-related protein Bet v 1 family | 10 | 134 | IPR000916 | GO:0006952 | |
| Vifa6g01311 | 168 | SUPERFAMILY | Bet v1-like | 12 | 137 | - | - | |
| Vifa6g01311 | 168 | FunFam | S-norcoclaurine synthase | 10 | 163 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa6g01311 | Vifa-Chr6 | 456344782 | 456345652 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa6g01311 | - | - | gmx:100305838 | 243.432 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vifa6g01311 | 6 | 456344782 | 456345652 | Vifa6g01311 | 6 | 456344782 | 456345652 | ECH |