Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01290 ATGGATAAACAATTATTCACTACTCCGGCATCTGTTCACCGGAGCTCCGATGAAGTCAGTTTTGCCGACACTGTTTTTGGATTTTGGGAGGAATTTCAAGACTCATCGGAAAATTCATCCAACTCCGGCAACGACGAGGCATTCGAAGATAATTCAGAAGAAGATGATAACAATTGTACCATGGAAAAAGATAAAGTTTTTTGGGAAGAACAAGATCAACTTCTCAAGGCAACTTTGTGCAAAAGTAGCTCAAGTGAGGCAAAAGTTAGGCAAGCTACAAAGGAGATTATGAGAGAATTGAACATGTGTGAGATGCTATGCTTGTGCCGCCGACCGGTGGTGGCAGTTAAGAGTTGTCGGAGTTGTTTGCTTAGTGAAATTTGTGATCGTTTATCAAATCTCGGTTATAATTCTGTAATTTGCAAATCAAAATGGAAAAGTTCATCAGAGATTCCATCTGGGGAGCATACATATTTAGAAGTGGCTGAAAATTCATCAAATATTAAAAGTGGTGTAATAAAAGTGATTATTGAATTGAATTTTAGAGGTGAATTTGAGATGGCACGTGGGAGTGAAGAATACAATCAATTGGTGAAGCGATTACCAGAGGTATTTGTTGGAAAATCAGAGAGGTTAAGAGTATTGGTTAAGATAATGTGTTCAGCTGCTAAAAAATGTATGAAGGAGAAGAAATTGCATTTAGCTCCATGGAGGAAACAAAAGTATATGCAAGCTAAGTGGGTTGGAAAATGTGATAGGTCGTTTTTGGAACCGTTGCCTAAAGTATATGAAACTAGGCCAACAAGATCAAAGGCTTCATTGCTCACTTGTGATTTGCTGCTAGAAAACATTGCAAGAAGCAATTGTACAGCAGTTGAAGTTATCTGA 888 0.3806 MDKQLFTTPASVHRSSDEVSFADTVFGFWEEFQDSSENSSNSGNDEAFEDNSEEDDNNCTMEKDKVFWEEQDQLLKATLCKSSSSEAKVRQATKEIMRELNMCEMLCLCRRPVVAVKSCRSCLLSEICDRLSNLGYNSVICKSKWKSSSEIPSGEHTYLEVAENSSNIKSGVIKVIIELNFRGEFEMARGSEEYNQLVKRLPEVFVGKSERLRVLVKIMCSAAKKCMKEKKLHLAPWRKQKYMQAKWVGKCDRSFLEPLPKVYETRPTRSKASLLTCDLLLENIARSNCTAVEVI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01290 295 Pfam PDDEXK-like family of unknown function 23 253 IPR006502 -
Vifa6g01290 295 PANTHER OS03G0796600 PROTEIN 15 260 IPR006502 -
Vifa6g01290 295 MobiDBLite consensus disorder prediction 33 58 - -
Vifa6g01290 295 NCBIfam uncharacterized plant-specific domain TIGR01615 127 254 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01290 Vifa-Chr6 450539105 450540209 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01290 - - tpra:123916511 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01290 6 450539105 450540209 Vifa6g01290 6 450539105 450540209 ECH