Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01285 ATGGAGCTAACTATTACACAACCTGATGATTTCCATCTCCATCTTCGTGACGGTGCTCTTCTTGAAGCTGTAGCCCCTCACAGTGCTAAACATTTTGGAAGAGCTATAGTCATGCCCAATTTGAAACCACCTATCACCACCACATCTTCCGCGATATCTTATCGAGAATCAATTTTGAAAGCAATACCTAAAACTTCCAATTTCAATCCTCTCATGACACTTTACCTCACTGATACTACAACTCCTCATGAGATTCAAATCGCAAAAAAAAGTGGATATGTTTATGGTATAAAGCTATATCCTGCTGGTGCTACAACAAACTCTCAAGATGGTGTTACAGATCTTTTTGGAAGTTGTTATTCTGTTCTTGAGGAAATGGTTGAGCAAGGTTTACCATTATTGGTTCATGGAGAGGTCACAAATCCAGAAGTTGATGTTTTTGATCGGGAAAAGGTCTTTATTGAAACAATTTTAGAGCCTTTAATTCAAAGGCTTCCGCAATTGAAGGTTGTGATGGAGCATATTACTACCATGGATGCCGTTAAGTTTGTAGAGTCTTGCAAAGAAGGTTATGTAGCCGCAACTGTTACACCTCAGCATATTCTTCTCAATCGAAATGCTTTGTTTCAAGGTGGCTTACAACCTCACAATTATTGTCTTCCCGTGCTTAAAAGAGAGATCCACAGACAGGCTATTGTTTCAGCTATCACTAGTGGAAGCAAGCGATTTTTCCTCGGAACTGATAGTGCTCCACATGATAGGCGTAATAAGGAATGTGCTTGTGGATGTGCTGGCATTTACAACTCCCCGGTTGCTCTATCACTATATGCTAAGGCTGGTGCACTGAACAAGCTGGAGGCTTTTACAAGTTTTAATGGACCTGACTTCTATGGCATCCCCAGAAACAAGTCAAAGATTAAACTGAGGAAATCACCTTGGAAAGTACCCGAGTGTCTGTCATTTCCTTTCGGAGATATTATTCCCATGTTTGCCGGTGAAACACTTGATTGGGAGGCATTGCTTATTTGA 1029 0.4072 MELTITQPDDFHLHLRDGALLEAVAPHSAKHFGRAIVMPNLKPPITTTSSAISYRESILKAIPKTSNFNPLMTLYLTDTTTPHEIQIAKKSGYVYGIKLYPAGATTNSQDGVTDLFGSCYSVLEEMVEQGLPLLVHGEVTNPEVDVFDREKVFIETILEPLIQRLPQLKVVMEHITTMDAVKFVESCKEGYVAATVTPQHILLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAITSGSKRFFLGTDSAPHDRRNKECACGCAGIYNSPVALSLYAKAGALNKLEAFTSFNGPDFYGIPRNKSKIKLRKSPWKVPECLSFPFGDIIPMFAGETLDWEALLI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01285 342 Gene3D - 1 339 - -
Vifa6g01285 342 Pfam Amidohydrolase family 10 315 IPR006680 GO:0016787
Vifa6g01285 342 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Vifa6g01285 342 CDD DHOase 3 337 IPR004721 GO:0004151|GO:0019856
Vifa6g01285 342 PANTHER DIHYDROOROTASE 1 338 IPR004721 GO:0004151|GO:0019856
Vifa6g01285 342 SUPERFAMILY Metallo-dependent hydrolases 2 338 IPR032466 -
Vifa6g01285 342 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
Vifa6g01285 342 FunFam Dihydroorotase 1 340 - -
Vifa6g01285 342 Hamap Dihydroorotase [pyrC]. 1 340 IPR004721 GO:0004151|GO:0019856
Vifa6g01285 342 NCBIfam dihydroorotase, homodimeric type 2 338 IPR004721 GO:0004151|GO:0019856
Vifa6g01285 342 PIRSF Dihydroorotase 1 341 IPR004721 GO:0004151|GO:0019856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01285 Vifa-Chr6 449562215 449564323 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01285 K01465 - gmx:100815210 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01285 6 449562215 449564323 Vifa6g01285 6 449562215 449564323 ECH