Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01283 ATGGAAAAATTGTATGAAGAGGTTGAAGAACCAGTGAGTCCTCATGGACAATATTTCAACAGCTCTGTAATGTGTGCATATATTTTTGCCTTCTTGGAATTAGATATTCCTTTTGATGAGTCACAAGCTATACCTTTGATCAAAGATCTCTTCCTCCCTATCAATCCACGCTTCTCCTCTATTATGGTTAGAGACAAAGATGGTAAGATGAGATGGCAAAAGGTTGAAGTGAAGATTCAAGAGAATGTAAAGATTCCTAAGTTTCCTGAAACCACAAACTCATCATCAACTGAGTTATATGACAATTATGTAACAAGTATTCTAACTTCAAAAACACCACAAGACAAACCACTTTGGGAAATTCATGTTATCAATTATCCAACAACAAATGCAGCTAGCACCATAATATTCAAACTTCATCATTCACTTGGTGATGGTTACTCCCTCATGGGTGCACTTCTTTCTTGTCTTCAAAGAGCTGATGATCCTTCTCTTCCTCTCTCTTTTCCTTCACGAATACCATTAGATCCAAAATATTCAAAGAAAAGTTTATTTAAGAAGCTATGCTTTGGTGTAAATGCATTTTTTAGCTCCATATCAGATTTTGGATCAAGCATAATCAAGACAAGAGTAATTCAAGATGACAAAACACCTATAAGGTCAGGATATCAAGGAAATGAACTTCAGCCTGTTGCCTTGTCAAACATATTATTATCTCTTGATCAAATGAGAGAAGTCAAATCAAAACTTGGGGTGACTATAAACGACGTGATTTGCGGGATAATCTTCTACGGGATTAGGCTATACATGGAAGAGATGAATGAGAAGACAAAAAGAGCAAATTCAACAGCAATTGTAATGCTGAACACAAGAAATATTAAAGGCTATCAATCATTGAAGGAAATGCAAAAACCAGAATCCAAAGGTCTTTGGGGAAATAAAATATCTTTCTTACAAATACCAATACCTAAGCCAAAGAAATCAGGAATTTGCAACCCTCTTGAGTATGTTTGGGAAGCCCGTGAAGTAATAAAGAGGAAGAAAAGTTCTTTCAGTGTTCATCTCATAGCTTTACTCATGGATTTGGAGATGAAATTAAGAGGGCCTGAAGTGGTTTCTAAGATAATCTATAACACAATTGGTAACTCAAGTGTTTTCATCTCAAACATGGTAGGGCCATTAGAGATGATGACTTTGGGAAATCATCCAGTAAATGGATTGTATTTCACCCAGACAGTTGGACCTGAGGATATAAACATTGCAATTATGAGCTATATGAAAACATTGAGGATCACTTTGAAAACTCTAAAGGGATTCATAGATGAACAAAAGTTGAAATTCTGCATGGATAAAGCAGTTGAACTGATATTCAAAGCAGCTAAGGAGATCTCTGAGAAACCAATCAAAAATTAA 1413 0.3546 MEKLYEEVEEPVSPHGQYFNSSVMCAYIFAFLELDIPFDESQAIPLIKDLFLPINPRFSSIMVRDKDGKMRWQKVEVKIQENVKIPKFPETTNSSSTELYDNYVTSILTSKTPQDKPLWEIHVINYPTTNAASTIIFKLHHSLGDGYSLMGALLSCLQRADDPSLPLSFPSRIPLDPKYSKKSLFKKLCFGVNAFFSSISDFGSSIIKTRVIQDDKTPIRSGYQGNELQPVALSNILLSLDQMREVKSKLGVTINDVICGIIFYGIRLYMEEMNEKTKRANSTAIVMLNTRNIKGYQSLKEMQKPESKGLWGNKISFLQIPIPKPKKSGICNPLEYVWEAREVIKRKKSSFSVHLIALLMDLEMKLRGPEVVSKIIYNTIGNSSVFISNMVGPLEMMTLGNHPVNGLYFTQTVGPEDINIAIMSYMKTLRITLKTLKGFIDEQKLKFCMDKAVELIFKAAKEISEKPIKN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01283 470 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 9 461 IPR045034 GO:0008374|GO:0045017
Vifa6g01283 470 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 103 258 IPR004255 GO:0004144|GO:0045017
Vifa6g01283 470 Pfam WS/DGAT C-terminal domain 311 456 IPR009721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01283 Vifa-Chr6 448299513 448301454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01283 6 433 Acyl Lipid Metabolism Gene Families AT3G49190 27.473 3.90e-57 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01283 - - gmx:100804927 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01283 6 448299513 448301454 Vifa6g01283 6 448299513 448301454 ECH