Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01237 ATGATCGGAACTGAAAGAACAACCGCTCGTAACAGACTCAGATCCCGTTCCCCTGAACCCGATGCCGATTCTCGTGGCACAGAACCTCATCTTCCTCGCGTCGTAACGCCATTTCCCGCGCCGAAGATCATGGACCTTCCTCAGTTTCAAGGTGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGTCCCCATCTCTATCTTGGAATTCGTGCAAGGACTCCACAATCTTTGATGGCTGGATTAATGTGGATTGGTGTGAAAGATGGTAGTAATCACTTGAGGCATGTCTGCAGATATGAGGATGGATTAAGTGCTTATGGTTGGACAAAGCATAATGGACGTGATTATGGGCATCAAGTATTAGTTGACCATGGCCTGATCTTGACTACCGAGTTCTTAAAATCAAATGGGGATGGCAGCGGTTATGGAGGCGACTGGGCAGTTCGAATTGGTGTGCAGATTGATAAGTCTAGGTGGAATGAGGAAGTTGGGCAAGGCGGCCAGCTCTTTTTCTATCTGGCTGATGAAGGTGGTAATGTTCTTGATGTAGGTAGAGAAAAATTGAACATTCACGAGAGTTCATTACTTGCATCTGGCTCTCGAACTGACATTGGAGACTGGCAGCTACATTTGAAGTCAACGGAATAA 651 0.4639 MIGTERTTARNRLRSRSPEPDADSRGTEPHLPRVVTPFPAPKIMDLPQFQGEHKESLYWGTYRPHLYLGIRARTPQSLMAGLMWIGVKDGSNHLRHVCRYEDGLSAYGWTKHNGRDYGHQVLVDHGLILTTEFLKSNGDGSGYGGDWAVRIGVQIDKSRWNEEVGQGGQLFFYLADEGGNVLDVGREKLNIHESSLLASGSRTDIGDWQLHLKSTE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01237 216 Gene3D - 44 216 IPR038518 -
Vifa6g01237 216 MobiDBLite consensus disorder prediction 9 28 - -
Vifa6g01237 216 Pfam Glycosyl hydrolase family 63 N-terminal domain 56 214 IPR031631 -
Vifa6g01237 216 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 32 214 IPR004888 GO:0004573|GO:0009311
Vifa6g01237 216 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01237 Vifa-Chr6 404457097 404459112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01237 28 214 Glycoside Hydrolase AT1G24320 47.594 1.13e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01237 K01228 - gmx:100795691 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01237 6 404457097 404459112 Vifa6g01237 6 404457097 404459112 ECH