Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01200 ATGGCACACAATGGAACAAACACAAAGAGCCCTCTGCATCTTCGCTGCAACAGCTTACCATCCACTCCTCACCCTCTAATATCACAATTTGAGGACAATTTGCAACGATTGAAGACTTCGGAATGTGCCTCTTCAGTGTCATCACCTTTGATATGCAACAAACTTAATGACGTGCAGGATTTGCATGATTGCATCAGTAAGTTACTTGAATTACCAATCGAACAACAAACCTTAGCACAAGAGTGCAATGAAAAGTGTGCCGATGACCTACTAGAAGGATCACTTAGGATCTTGGATATCTGCAGTATAGCTAAGGAATGCCTTTTGCTATCAAAGGAAAACACACATGAACTACAATCACTCATTAGAAGAAAGAGAGGAGTTGAAACCGGATTCAAAGCCGAGGGTGTAAAATACATGGCTTTGAGGAAGAACATGAAGAAGCAAATTCGGAAGGCGTTGGTAAATTTGAAAGCAAACAAGTTGATTGCCTCTTCCTCAAACAACCAAGACAATAACTCTTCACCTATGCTTGGATTCTTGAAAGAAGCAGAAACAGTCACTATAAGCTCGCTAGAACGTTTACTGCTATTTATCTGTAATCCAAAAGGACAGTCAAATAACAGAAGATGGTCAGCAATATCCATGTTGATGCATTCTAAAAGAGTTGTTTGTGACTCTCAAGATTCAGACACAAATGAATTTGAGAAAGTGGATGCAGCTTTGTTGTCTCTCATCAGCCACAAGTCATTATCTACTGAAAATTTTCAAAGGCATATGGAAGATTTGGAGATATGCATTCAAGATCTAGAAATAGGAGTTGAACAAATTACAAGAAAATTAATTAGAAATAGAGTTTCACTTCTTAACATCTTCAACCATTAA 885 0.3808 MAHNGTNTKSPLHLRCNSLPSTPHPLISQFEDNLQRLKTSECASSVSSPLICNKLNDVQDLHDCISKLLELPIEQQTLAQECNEKCADDLLEGSLRILDICSIAKECLLLSKENTHELQSLIRRKRGVETGFKAEGVKYMALRKNMKKQIRKALVNLKANKLIASSSNNQDNNSSPMLGFLKEAETVTISSLERLLLFICNPKGQSNNRRWSAISMLMHSKRVVCDSQDSDTNEFEKVDAALLSLISHKSLSTENFQRHMEDLEICIQDLEIGVEQITRKLIRNRVSLLNIFNH 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01200 294 Coils Coil 260 280 - -
Vifa6g01200 294 Pfam Protein BPS1 54 291 IPR004320 GO:0048364|GO:0048367
Vifa6g01200 294 PANTHER OS06G0725500 PROTEIN 9 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01200 Vifa-Chr6 387947239 387948123 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01200 - - gmx:100783166 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01200 6 387947239 387948123 Vifa6g01200 6 387947239 387948123 ECH