Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01154 ATGAGAATAGTTACATGGAATACAATCATCCTCGCAATCACCTTGCAATCACCTTCTCAAGCACCTTCTCAAGCCCTTTCAAATCCGCCTTTGCAGATTCTCGTTCTTTACCTTTTTTTGGTTTTGGTTTTGGACTTGGATAAAATGAACATGCATATCGTTTCGTCTACTTTTGGAGATTGTATAAGAAGGATCCTTATCTCGTTGCGTTGTTTCGTTCTTCTTCTTCACGGTGAGGTTTACCCTGTTTCCAAAATCACTGATTTCACAAAGATGAATCGTGAAAAGTTAATTAAGATGGCTGGTTCAGTTCGAACTGGTGGAAAGGGTACTGTCAGAAGAAAGAAGAAGGCCGTCCACAAGACAACAACTACAGATGACAAAAGGCTTCAGAGCACCCTGAAGAGAATTGGGGTGAATGCCATCCCTCAAATTGAGGAGGTCAATATCTTTAAGGATGACGTTGTCATCCAATTCTCAAACCCCAAAGTTCAAGCATCCATTGCTGCTAATACATGGGTTGTTAGTGGTGCTCCTCAAACCAAGAAGTTGCAGGACATACTTCCTAGCATTATCCACCAATTAGGGCCGGATAATTTGGAAAACCTGAAGAAGATAGCTGAGCAGTTCAATAAGCAGGTTCCTGAAGCAGGTGCTGGCTCAGCCACAGTTCAAGAAGAGAATGATGACGACGTTCCGGAGCTTGTCCCGGGAGAGACTTTTGAGACAGCTGCTGAGGAGGCCAAGGATAGTTAG 756 0.4339 MRIVTWNTIILAITLQSPSQAPSQALSNPPLQILVLYLFLVLVLDLDKMNMHIVSSTFGDCIRRILISLRCFVLLLHGEVYPVSKITDFTKMNREKLIKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPQIEEVNIFKDDVVIQFSNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKIAEQFNKQVPEAGAGSATVQEENDDDVPELVPGETFETAAEEAKDS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01154 251 SMART NAC_2 127 182 IPR002715 -
Vifa6g01154 251 MobiDBLite consensus disorder prediction 216 251 - -
Vifa6g01154 251 FunFam Transcription factor BTF3 homolog 139 195 - -
Vifa6g01154 251 ProSiteProfiles NAC A/B domain profile. 124 188 IPR002715 -
Vifa6g01154 251 CDD NAC_BTF3 95 210 - -
Vifa6g01154 251 Pfam NAC domain 127 182 IPR002715 -
Vifa6g01154 251 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 91 249 IPR039370 -
Vifa6g01154 251 Gene3D - 139 195 IPR038187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01154 Vifa-Chr6 373581916 373586261 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01154 K01527 - gmx:100500153 281.952