Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01152 ATGGCTTCGTTACTACACTCTTCATCTTCATGGTCCTCTTCGTTGCCGATGAAACCAAACATGGGATTGATGGTGATGCTTCCTCCAACAACGCTAAAGCCTTCGAAGCTGTGTTGTGTTAAGAACCCCAACAGCGAGGAAGTTGTCAATTCGATTGAAGCTAAAAAAATCGGTCCTGTCGATCCTGTAAAGCTCGCGTTTGAGAAAGCTAAAGCTTATAAAAAATCGATTAAATCTAAGTCTAGTTTGGGAATTGAGGAAAGTAGTGGTGGCGAAGGCAATTCGGTTAAAGAGGATACAAATGTTATTGATGGAGGGAAAAAGGATATGCCAGTTTCGGTAAAGATTGCTATGGAGAAGGCTAGGAAGTATAAGCAGAATAAAGGAGTTGCTGTTACTGTTAGTGGAACTGATCAAGGATTACAGGAAGGGAGAGTGAGGACGTGGGATGAAAATATGAATGACAATAGTGTTGGTAAGAAAGTTGAACTGTCTGTTTCAAAGATGGATTTTGTGGGGCTTGGTTTTGCGGATAAGCCGAAGACAAGGGGACTGCCGCCTGGTCTGGTTCCTATTTCAGACTCTTACTTAGATGGTGACTTACCTGAGGTGGAGTTTATTGTCGGAGACACAACAAAATTCGATGCAAAAACAACAGCTCTGCAACCTCAACAGACTATGGAAGATGAGTCAGAACTGTATAAGCCAAAAGTTTCTACATGGGGTGTATTTCCTAGACCTAACAATATTTCAAAAACATTTGGAGGTGGAAGAGTTATACGTCCTGGAGAGGTTTTAGAGACTGAAGAAGAAAAGGCGATAAAAGAAGAGCGCACAAAGCAGAAGCTTGCTGCTTACAAGAAGAAATATGGATTAAATATTGATCCAAAGCTAAAAGCCGAGTGCCAGGAGGAATTGAACAAAGGGGACTTGTTAATGGATGCGGGAAAACTGAAGGATGCATTACCCTATTATGAGAAGGTTATTGACAAATTACCCTTCCAGAGTGAGCTCCATGGATTAGCAGCCTTACAATGGTCGATTTGTCTAGACTCCCTCAGTAGGCACAATGAAGCTCGAAGTATGTATGAAAAGCTTCAATCTCACCCAAATGTTAAAGTAGGCAAGAAAGCAAGACATTTCATGTACAGCTTTCAGGCTATGGAAATGATGAAGGTGAGGACAGGTTCTTCTCCTTATTTAAAGAACACATTCTACCAGAGTTATTTTGATGCCTTTATTGAAAAGAAAACAGACAATACTGTTAAAGTTAAAGATGAAGTGGTTCAAGAAAGTTCGATGAATCAGGTTATTCTGTATATTCTTTTTCTAACTTCTCCTATTTTTGTTGTACTACTTCTTGCACTGCAGAAAAGAATATAA 1383 0.3999 MASLLHSSSSWSSSLPMKPNMGLMVMLPPTTLKPSKLCCVKNPNSEEVVNSIEAKKIGPVDPVKLAFEKAKAYKKSIKSKSSLGIEESSGGEGNSVKEDTNVIDGGKKDMPVSVKIAMEKARKYKQNKGVAVTVSGTDQGLQEGRVRTWDENMNDNSVGKKVELSVSKMDFVGLGFADKPKTRGLPPGLVPISDSYLDGDLPEVEFIVGDTTKFDAKTTALQPQQTMEDESELYKPKVSTWGVFPRPNNISKTFGGGRVIRPGEVLETEEEKAIKEERTKQKLAAYKKKYGLNIDPKLKAECQEELNKGDLLMDAGKLKDALPYYEKVIDKLPFQSELHGLAALQWSICLDSLSRHNEARSMYEKLQSHPNVKVGKKARHFMYSFQAMEMMKVRTGSSPYLKNTFYQSYFDAFIEKKTDNTVKVKDEVVQESSMNQVILYILFLTSPIFVVLLLALQKRI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01152 460 MobiDBLite consensus disorder prediction 81 104 - -
Vifa6g01152 460 Gene3D Tetratricopeptide repeat domain 242 373 IPR011990 GO:0005515
Vifa6g01152 460 PANTHER CYTOCHROME C OXIDASE SUBUNIT 2 459 - -
Vifa6g01152 460 SUPERFAMILY TPR-like 306 366 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01152 - - tpra:123916425 587.415