Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01141 ATGGTAGGCGGTATTTCAGTAACCCACCCAGCAAGCACCATTTTAACATGTTGGACATATAGTCGAAAACCTGGTAACAAACCACGGACAGTATCAATGTCTCTCAGAAACGGAAATAGCAATAAACAGCAGCTAGAACGTGAAAGGCTCTATCTCGGCTTCGACTTCGGCACTTCCGGCGCCAGGTTTGCCGTTATTGACATCGGCGGCACAATTCAGGCCGAGGCCAAGAGACACTATCCACTATACTCGAACGGAGAGTCACGTGATTGGGTACGTTCATGGAAGGAGACACTTTTTTTGTTGCTTCAAGATATTCCACCTAACCTTCGCAAACACATTGTATCCATTTCTATTGATGGTACATCTGCAACTACTATCATTCTTGATAGTGACACAGGAGAGCCGTTGTGTAGACCTTTTCTTTATAATGAAACTTGTTCTGAAGCACTACCTTCTGTAAAATCTATTGCACCTCCAAACCATACAGTATGCTCTGCTACGTCCACTCTGTGTAAGCTTGTCTCGTGGTGGAATCGTGATGGTTTGAACGAAAAATCTGCTCTGTTGTTGCACCAAGCAGATTGGCTTTTATGGCTTCTTCATGGAAAGCTTGGAGTTTCAGATTATAATAATGCTCTGAAGGTTGGATATGATCCTGAAGCTGACTCATATCCGTCATGGCTAATCTCTCAACCTTACTCTCATCTTTTACCTTCGGTTGTTGCACCAGGAACTCCAATTGCTTGTTTAAAGGAGGAACTTAGAAATAAATTTGGTTTTCAGAAGGAGTGTGTTGTATGCACTGGAACCACGGACAGTATAGCTGCATTTCTTGCAGCTCGAGTTACTCAACCTGGAAAAGCTGTGACTTCATTGGGTTCAACACTTGCTATTAAACTATTAAGCAACACAAGAGTTGAGGATTCTCGGTTTGGGGTGTATAGTCATCGCCTTGATGATAAATGGCTTGTTGGTGGTGCTTCAAACACTGGTGGAGCTGTTCTTAGACAGCTTTTCACGGATGATCAATTAAAGAAACTGAGTGAACAAATCAATCCCTCACAAATATCTCTTCTGGACTACTATCCCCTTCCAAAAGCTGGTGAAAGATTTCCAATTGCAGATCCAGATTTGGCTCCAAGGCTACTTCCACGTCCAGAAAATGATGCTGAATACTTGCATGGGATTTTGGAATCTATTGCACGAATAGAGGAAAAGGGATATGGGTTGCTAAAGGAGCTCGGCGCAACTGCAGTAGATCAAGTTTTCACAGCCGGTGGAGGAGCGAATAATGAGAAGTGGACAAAGATAAGAGAGAGGGTGCTTGGTTTACCAGTGAGTCGTGCAAATCAAACAGAAGCTGCTTATGGAACTGCATTGCTGGCAATTAAGGGTGATCAACAAAATATTTTGTGA 1419 0.4306 MVGGISVTHPASTILTCWTYSRKPGNKPRTVSMSLRNGNSNKQQLERERLYLGFDFGTSGARFAVIDIGGTIQAEAKRHYPLYSNGESRDWVRSWKETLFLLLQDIPPNLRKHIVSISIDGTSATTIILDSDTGEPLCRPFLYNETCSEALPSVKSIAPPNHTVCSATSTLCKLVSWWNRDGLNEKSALLLHQADWLLWLLHGKLGVSDYNNALKVGYDPEADSYPSWLISQPYSHLLPSVVAPGTPIACLKEELRNKFGFQKECVVCTGTTDSIAAFLAARVTQPGKAVTSLGSTLAIKLLSNTRVEDSRFGVYSHRLDDKWLVGGASNTGGAVLRQLFTDDQLKKLSEQINPSQISLLDYYPLPKAGERFPIADPDLAPRLLPRPENDAEYLHGILESIARIEEKGYGLLKELGATAVDQVFTAGGGANNEKWTKIRERVLGLPVSRANQTEAAYGTALLAIKGDQQNIL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01141 472 PANTHER SUGAR KINASE 50 466 - -
Vifa6g01141 472 FunFam D-ribulose kinase isoform X1 277 470 - -
Vifa6g01141 472 SUPERFAMILY Actin-like ATPase domain 285 465 IPR043129 -
Vifa6g01141 472 SUPERFAMILY Actin-like ATPase domain 50 278 IPR043129 -
Vifa6g01141 472 Gene3D - 47 276 - -
Vifa6g01141 472 Gene3D - 277 469 - -
Vifa6g01141 472 PIRSF GlpK 48 470 IPR000577 GO:0005975|GO:0016301
Vifa6g01141 472 FunFam D-ribulose kinase 47 276 - -
Vifa6g01141 472 Pfam FGGY family of carbohydrate kinases, N-terminal domain 50 279 IPR018484 GO:0005975|GO:0016301
Vifa6g01141 472 Pfam FGGY family of carbohydrate kinases, C-terminal domain 317 464 IPR018485 GO:0005975|GO:0016301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01141 K22935 - gmx:100779892 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01141 6 369557360 369565347 Vifa6g01141 6 369557360 369565347 ECH